Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA01g02780 | A01 | 1282936 | G | A | upstream_gene_variant | MODIFIER | c.-766G>A| |
S296 |
2 | BAA01g02780 | A01 | 1283145 | C | T | upstream_gene_variant | MODIFIER | c.-557C>T| |
S221 |
3 | BAA01g02780 | A01 | 1283710 | G | A | synonymous_variant | LOW | c.9G>A|p.Pro3Pro |
S204 |
4 | BAA01g02780 | A01 | 1286899 | G | A | missense_variant&splice_region_variant | MODERATE | c.1588G>A|p.Val530Met |
S297 |
5 | BAA01g02780 | A01 | 1287490 | G | A | missense_variant | MODERATE | c.2179G>A|p.Glu727Lys |
S83 S88 |
6 | BAA01g02780 | A01 | 1287749 | C | T | missense_variant | MODERATE | c.2438C>T|p.Pro813Leu |
S44 |
7 | BAA01g02780 | A01 | 1287952 | C | T | missense_variant | MODERATE | c.2641C>T|p.Pro881Ser |
S113 |
8 | BAA01g02780 | A01 | 1288396 | C | T | intron_variant | MODIFIER | c.2821-76C>T| |
S30 S31 |
9 | BAA01g02780 | A01 | 1290198 | G | A | missense_variant | MODERATE | c.4345G>A|p.Glu1449Lys |
S259 |
10 | BAA01g02780 | A01 | 1291037 | C | T | splice_region_variant&intron_variant | LOW | c.5004+5C>T| |
S66 |
11 | BAA01g02780 | A01 | 1292666 | G | A | missense_variant | MODERATE | c.5875G>A|p.Gly1959Ser |
S159 S243 |
12 | BAA01g02780 | A01 | 1292698 | G | A | synonymous_variant | LOW | c.5907G>A|p.Arg1969Arg |
S95 |
13 | BAA01g02780 | A01 | 1293255 | C | T | intron_variant | MODIFIER | c.6250-159C>T| |
S240 |
14 | BAA01g02780 | A01 | 1294053 | C | T | synonymous_variant | LOW | c.6805C>T|p.Leu2269Leu |
S221 |
15 | BAA01g02780 | A01 | 1294067 | G | A | synonymous_variant | LOW | c.6819G>A|p.Leu2273Leu |
S7 |
16 | BAA01g02780 | A01 | 1294696 | C | T | missense_variant | MODERATE | c.7190C>T|p.Ser2397Leu |
S182 |
17 | BAA01g02780 | A01 | 1294710 | G | A | missense_variant | MODERATE | c.7204G>A|p.Glu2402Lys |
S136 |
18 | BAA01g02780 | A01 | 1294875 | C | T | synonymous_variant | LOW | c.7278C>T|p.Leu2426Leu |
S262 |
19 | BAA01g02780 | A01 | 1295311 | C | T | intron_variant | MODIFIER | c.7680+34C>T| |
S88 |
20 | BAA01g02780 | A01 | 1295546 | G | A | synonymous_variant | LOW | c.7788G>A|p.Lys2596Lys |
S103 |
21 | BAA01g02780 | A01 | 1296612 | C | T | missense_variant | MODERATE | c.8854C>T|p.Leu2952Phe |
S231 |
22 | BAA01g02780 | A01 | 1297458 | C | T | synonymous_variant | LOW | c.9291C>T|p.Cys3097Cys |
S221 |
23 | BAA01g02780 | A01 | 1297529 | G | A | missense_variant | MODERATE | c.9362G>A|p.Ser3121Asn |
S157 S163 |
24 | BAA01g02780 | A01 | 1298493 | G | A | missense_variant | MODERATE | c.10063G>A|p.Gly3355Ser |
S123 |
25 | BAA01g02780 | A01 | 1298503 | G | A | missense_variant | MODERATE | c.10073G>A|p.Arg3358Lys |
S136 S15 S156 S2 S3 S4 S6 |