Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA01g12110 | A01 | 5674034 | G | A | upstream_gene_variant | MODIFIER | c.-4823G>A| |
S96 |
2 | BAA01g12110 | A01 | 5678122 | C | T | upstream_gene_variant | MODIFIER | c.-735C>T| |
S25 |
3 | BAA01g12110 | A01 | 5678673 | G | A | upstream_gene_variant | MODIFIER | c.-184G>A| |
S28 |
4 | BAA01g12110 | A01 | 5679198 | C | T | stop_gained | HIGH | c.265C>T|p.Gln89* |
S68 |
5 | BAA01g12110 | A01 | 5679479 | C | T | synonymous_variant | LOW | c.546C>T|p.Phe182Phe |
S48 |
6 | BAA01g12110 | A01 | 5680118 | C | T | intron_variant | MODIFIER | c.1000+23C>T| |
S179 |
7 | BAA01g12110 | A01 | 5680269 | G | A | intron_variant | MODIFIER | c.1053+36G>A| |
S293 |
8 | BAA01g12110 | A01 | 5680309 | C | T | intron_variant | MODIFIER | c.1054-9C>T| |
S146 |
9 | BAA01g12110 | A01 | 5680639 | C | T | missense_variant | MODERATE | c.1283C>T|p.Pro428Leu |
S135 |
10 | BAA01g12110 | A01 | 5683079 | C | T | synonymous_variant | LOW | c.2520C>T|p.Ser840Ser |
S166 |
11 | BAA01g12110 | A01 | 5683093 | C | T | splice_region_variant&intron_variant | LOW | c.2526+8C>T| |
S130 |
12 | BAA01g12110 | A01 | 5683374 | C | T | synonymous_variant | LOW | c.2709C>T|p.Val903Val |
S43 |
13 | BAA01g12110 | A01 | 5683440 | G | A | downstream_gene_variant | MODIFIER | c.*3G>A| |
S183 S198 |
14 | BAA01g12110 | A01 | 5683791 | C | T | downstream_gene_variant | MODIFIER | c.*354C>T| |
S160 |
15 | BAA01g12110 | A01 | 5685525 | G | A | downstream_gene_variant | MODIFIER | c.*2088G>A| |
S142 |