Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA01g19230 | A01 | 9428956 | G | A | upstream_gene_variant | MODIFIER | c.-4899G>A| |
S98 |
2 | BAA01g19230 | A01 | 9429827 | C | T | upstream_gene_variant | MODIFIER | c.-4028C>T| |
S247 |
3 | BAA01g19230 | A01 | 9432140 | G | A | upstream_gene_variant | MODIFIER | c.-1715G>A| |
S224 |
4 | BAA01g19230 | A01 | 9432731 | C | T | upstream_gene_variant | MODIFIER | c.-1124C>T| |
S107 |
5 | BAA01g19230 | A01 | 9433885 | C | T | synonymous_variant | LOW | c.31C>T|p.Leu11Leu |
S8 |
6 | BAA01g19230 | A01 | 9435091 | G | A | synonymous_variant | LOW | c.1161G>A|p.Leu387Leu |
S75 S81 |
7 | BAA01g19230 | A01 | 9435146 | G | A | missense_variant | MODERATE | c.1216G>A|p.Val406Met |
S67 |
8 | BAA01g19230 | A01 | 9435430 | C | T | synonymous_variant | LOW | c.1500C>T|p.Cys500Cys |
S207 |
9 | BAA01g19230 | A01 | 9435463 | G | A | synonymous_variant | LOW | c.1533G>A|p.Arg511Arg |
S43 |
10 | BAA01g19230 | A01 | 9435499 | C | T | synonymous_variant | LOW | c.1569C>T|p.Ser523Ser |
S18 |
11 | BAA01g19230 | A01 | 9435757 | G | A | intron_variant | MODIFIER | c.1705+122G>A| |
S168 |
12 | BAA01g19230 | A01 | 9437225 | C | T | intron_variant | MODIFIER | c.1918+568C>T| |
S208 S93 |
13 | BAA01g19230 | A01 | 9437600 | G | A | intron_variant | MODIFIER | c.1919-873G>A| |
S236 |
14 | BAA01g19230 | A01 | 9437728 | C | T | intron_variant | MODIFIER | c.1919-745C>T| |
S20 |
15 | BAA01g19230 | A01 | 9437953 | C | T | intron_variant | MODIFIER | c.1919-520C>T| |
S166 |
16 | BAA01g19230 | A01 | 9438245 | G | A | intron_variant | MODIFIER | c.1919-228G>A| |
S245 S249 |
17 | BAA01g19230 | A01 | 9438340 | C | T | intron_variant | MODIFIER | c.1919-133C>T| |
S112 |
18 | BAA01g19230 | A01 | 9438365 | C | T | intron_variant | MODIFIER | c.1919-108C>T| |
S273 |
19 | BAA01g19230 | A01 | 9438479 | G | A | missense_variant | MODERATE | c.1925G>A|p.Gly642Glu |
S236 |
20 | BAA01g19230 | A01 | 9438497 | G | A | stop_gained | HIGH | c.1943G>A|p.Trp648* |
S204 |
21 | BAA01g19230 | A01 | 9439815 | G | A | downstream_gene_variant | MODIFIER | c.*15G>A| |
S172 S217 |
22 | BAA01g19230 | A01 | 9440209 | G | A | downstream_gene_variant | MODIFIER | c.*409G>A| |
S202 |
23 | BAA01g19230 | A01 | 9440229 | G | A | downstream_gene_variant | MODIFIER | c.*429G>A| |
S13 S140 S168 S219 |
24 | BAA01g19230 | A01 | 9440410 | G | A | downstream_gene_variant | MODIFIER | c.*610G>A| |
S59 |
25 | BAA01g19230 | A01 | 9440429 | G | A | downstream_gene_variant | MODIFIER | c.*629G>A| |
S245 |