Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA01g23420 | A01 | 12062501 | G | A | upstream_gene_variant | MODIFIER | c.-4403G>A| |
S163 |
2 | BAA01g23420 | A01 | 12063000 | G | A | upstream_gene_variant | MODIFIER | c.-3904G>A| |
S16 |
3 | BAA01g23420 | A01 | 12063067 | C | T | upstream_gene_variant | MODIFIER | c.-3837C>T| |
S170 |
4 | BAA01g23420 | A01 | 12063147 | G | A | upstream_gene_variant | MODIFIER | c.-3757G>A| |
S180 |
5 | BAA01g23420 | A01 | 12063978 | C | T | upstream_gene_variant | MODIFIER | c.-2926C>T| |
S18 |
6 | BAA01g23420 | A01 | 12064215 | G | A | upstream_gene_variant | MODIFIER | c.-2689G>A| |
S238 S252 |
7 | BAA01g23420 | A01 | 12064667 | C | T | upstream_gene_variant | MODIFIER | c.-2237C>T| |
S115 S117 S23 S266 S297 S55 S9 |
8 | BAA01g23420 | A01 | 12066910 | C | T | stop_gained | HIGH | c.7C>T|p.Gln3* |
S275 |
9 | BAA01g23420 | A01 | 12067345 | G | A | missense_variant | MODERATE | c.442G>A|p.Gly148Ser |
S169 |
10 | BAA01g23420 | A01 | 12067724 | G | A | missense_variant | MODERATE | c.821G>A|p.Gly274Glu |
S46 |
11 | BAA01g23420 | A01 | 12067909 | G | A | missense_variant | MODERATE | c.1006G>A|p.Gly336Ser |
S60 |
12 | BAA01g23420 | A01 | 12067928 | G | A | missense_variant | MODERATE | c.1025G>A|p.Ser342Asn |
S262 |
13 | BAA01g23420 | A01 | 12068259 | G | A | synonymous_variant | LOW | c.1356G>A|p.Glu452Glu |
S308 |
14 | BAA01g23420 | A01 | 12069253 | G | A | downstream_gene_variant | MODIFIER | c.*685G>A| |
S84 S93 |
15 | BAA01g23420 | A01 | 12070670 | C | T | downstream_gene_variant | MODIFIER | c.*2102C>T| |
S184 |
16 | BAA01g23420 | A01 | 12072169 | G | A | downstream_gene_variant | MODIFIER | c.*3601G>A| |
S56 |
17 | BAA01g23420 | A01 | 12072704 | C | T | downstream_gene_variant | MODIFIER | c.*4136C>T| |
S10 |