Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA01g24420 | A01 | 12870262 | G | A | upstream_gene_variant | MODIFIER | c.-4620G>A| |
S212 |
2 | BAA01g24420 | A01 | 12870610 | A | T | upstream_gene_variant | MODIFIER | c.-4272A>T| |
S257 |
3 | BAA01g24420 | A01 | 12872442 | C | T | upstream_gene_variant | MODIFIER | c.-2440C>T| |
S256 |
4 | BAA01g24420 | A01 | 12872715 | G | A | upstream_gene_variant | MODIFIER | c.-2167G>A| |
S306 S308 |
5 | BAA01g24420 | A01 | 12873179 | G | A | upstream_gene_variant | MODIFIER | c.-1703G>A| |
S57 |
6 | BAA01g24420 | A01 | 12873966 | G | A | upstream_gene_variant | MODIFIER | c.-916G>A| |
S197 |
7 | BAA01g24420 | A01 | 12874626 | C | T | upstream_gene_variant | MODIFIER | c.-256C>T| |
S148 S30 S31 |
8 | BAA01g24420 | A01 | 12875004 | C | T | synonymous_variant | LOW | c.123C>T|p.Val41Val |
S170 |
9 | BAA01g24420 | A01 | 12875035 | C | T | stop_gained | HIGH | c.154C>T|p.Gln52* |
S218 |
10 | BAA01g24420 | A01 | 12875187 | G | A | synonymous_variant | LOW | c.306G>A|p.Lys102Lys |
S278 |
11 | BAA01g24420 | A01 | 12876133 | G | A | missense_variant | MODERATE | c.1252G>A|p.Val418Met |
S110 |
12 | BAA01g24420 | A01 | 12876283 | G | A | missense_variant | MODERATE | c.1402G>A|p.Glu468Lys |
S105 S106 |
13 | BAA01g24420 | A01 | 12879254 | C | T | downstream_gene_variant | MODIFIER | c.*2924C>T| |
S210 S225 |
14 | BAA01g24420 | A01 | 12879325 | G | A | downstream_gene_variant | MODIFIER | c.*2995G>A| |
S163 |
15 | BAA01g24420 | A01 | 12880885 | C | T | downstream_gene_variant | MODIFIER | c.*4555C>T| |
S6 |