Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA02g03410 | A02 | 1516555 | C | T | downstream_gene_variant | MODIFIER | c.*1834G>A| |
S175 |
2 | BAA02g03410 | A02 | 1518421 | G | A | missense_variant | MODERATE | c.1573C>T|p.Pro525Ser |
S165 |
3 | BAA02g03410 | A02 | 1518580 | C | T | missense_variant | MODERATE | c.1501G>A|p.Ala501Thr |
S219 |
4 | BAA02g03410 | A02 | 1519141 | T | G | splice_region_variant&intron_variant | LOW | c.1196+3A>C| |
S111 S153 S16 S222 S243 S57 |
5 | BAA02g03410 | A02 | 1519173 | C | T | synonymous_variant | LOW | c.1167G>A|p.Gln389Gln |
S152 |
6 | BAA02g03410 | A02 | 1521034 | C | T | splice_region_variant&synonymous_variant | LOW | c.483G>A|p.Arg161Arg |
S54 |
7 | BAA02g03410 | A02 | 1521497 | G | A | synonymous_variant | LOW | c.108C>T|p.Tyr36Tyr |
S266 |
8 | BAA02g03410 | A02 | 1521946 | G | A | upstream_gene_variant | MODIFIER | c.-342C>T| |
S118 |
9 | BAA02g03410 | A02 | 1522115 | C | T | upstream_gene_variant | MODIFIER | c.-511G>A| |
S216 |
10 | BAA02g03410 | A02 | 1524091 | C | T | upstream_gene_variant | MODIFIER | c.-2487G>A| |
S249 |
11 | BAA02g03410 | A02 | 1524413 | G | A | upstream_gene_variant | MODIFIER | c.-2809C>T| |
S174 |
12 | BAA02g03410 | A02 | 1524414 | G | A | upstream_gene_variant | MODIFIER | c.-2810C>T| |
S50 |
13 | BAA02g03410 | A02 | 1525084 | G | A | upstream_gene_variant | MODIFIER | c.-3480C>T| |
S52 |
14 | BAA02g03410 | A02 | 1525735 | G | A | upstream_gene_variant | MODIFIER | c.-4131C>T| |
S251 |