Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA02g03600 | A02 | 1582266 | C | T | upstream_gene_variant | MODIFIER | c.-3735C>T| |
S243 S299 |
2 | BAA02g03600 | A02 | 1582623 | G | A | upstream_gene_variant | MODIFIER | c.-3378G>A| |
S155 S211 |
3 | BAA02g03600 | A02 | 1587562 | C | T | splice_region_variant&intron_variant | LOW | c.892-3C>T| |
S133 |
4 | BAA02g03600 | A02 | 1587625 | G | A | missense_variant | MODERATE | c.952G>A|p.Val318Met |
S189 |
5 | BAA02g03600 | A02 | 1588174 | C | T | intron_variant | MODIFIER | c.1250-164C>T| |
S104 S105 |
6 | BAA02g03600 | A02 | 1589375 | C | T | synonymous_variant | LOW | c.1872C>T|p.Leu624Leu |
S15 S3 |
7 | BAA02g03600 | A02 | 1591691 | G | A | downstream_gene_variant | MODIFIER | c.*2065G>A| |
S52 |
8 | BAA02g03600 | A02 | 1591826 | C | T | downstream_gene_variant | MODIFIER | c.*2200C>T| |
S228 S244 S289 S290 |
9 | BAA02g03600 | A02 | 1591878 | C | T | downstream_gene_variant | MODIFIER | c.*2252C>T| |
S197 |
10 | BAA02g03600 | A02 | 1591892 | C | T | downstream_gene_variant | MODIFIER | c.*2266C>T| |
S133 |
11 | BAA02g03600 | A02 | 1591898 | C | T | downstream_gene_variant | MODIFIER | c.*2272C>T| |
S216 |
12 | BAA02g03600 | A02 | 1591909 | C | T | downstream_gene_variant | MODIFIER | c.*2283C>T| |
S171 |
13 | BAA02g03600 | A02 | 1591977 | C | T | downstream_gene_variant | MODIFIER | c.*2351C>T| |
S256 |