Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA02g06500 | A02 | 2752366 | G | A | downstream_gene_variant | MODIFIER | c.*1746C>T| |
S286 |
2 | BAA02g06500 | A02 | 2752595 | C | T | downstream_gene_variant | MODIFIER | c.*1517G>A| |
S100 |
3 | BAA02g06500 | A02 | 2754696 | G | A | synonymous_variant | LOW | c.5136C>T|p.Val1712Val |
S139 |
4 | BAA02g06500 | A02 | 2754948 | G | A | missense_variant | MODERATE | c.5006C>T|p.Ala1669Val |
S246 |
5 | BAA02g06500 | A02 | 2755114 | C | T | missense_variant | MODERATE | c.4840G>A|p.Asp1614Asn |
S274 |
6 | BAA02g06500 | A02 | 2755410 | C | T | missense_variant | MODERATE | c.4621G>A|p.Asp1541Asn |
S108 |
7 | BAA02g06500 | A02 | 2756129 | C | T | missense_variant | MODERATE | c.4069G>A|p.Asp1357Asn |
S240 |
8 | BAA02g06500 | A02 | 2756552 | C | T | missense_variant | MODERATE | c.3818G>A|p.Arg1273Lys |
S46 |
9 | BAA02g06500 | A02 | 2758041 | G | A | stop_gained | HIGH | c.3073C>T|p.Gln1025* |
S202 |
10 | BAA02g06500 | A02 | 2758286 | G | A | missense_variant | MODERATE | c.2939C>T|p.Pro980Leu |
S157 |
11 | BAA02g06500 | A02 | 2759798 | C | T | synonymous_variant | LOW | c.1848G>A|p.Glu616Glu |
S38 |
12 | BAA02g06500 | A02 | 2760221 | C | T | intron_variant | MODIFIER | c.1485+51G>A| |
S216 |
13 | BAA02g06500 | A02 | 2761317 | G | A | intron_variant | MODIFIER | c.981+125C>T| |
S153 S257 S263 |
14 | BAA02g06500 | A02 | 2761978 | C | T | missense_variant | MODERATE | c.601G>A|p.Asp201Asn |
S109 |
15 | BAA02g06500 | A02 | 2762603 | C | T | splice_acceptor_variant&intron_variant | HIGH | c.270-1G>A| |
S123 |
16 | BAA02g06500 | A02 | 2762906 | C | T | intron_variant | MODIFIER | c.269+210G>A| |
S224 |
17 | BAA02g06500 | A02 | 2763081 | G | A | intron_variant | MODIFIER | c.269+35C>T| |
S238 |
18 | BAA02g06500 | A02 | 2763105 | G | A | intron_variant | MODIFIER | c.269+11C>T| |
S190 |
19 | BAA02g06500 | A02 | 2764245 | G | A | upstream_gene_variant | MODIFIER | c.-861C>T| |
S244 |
20 | BAA02g06500 | A02 | 2765452 | G | A | upstream_gene_variant | MODIFIER | c.-2068C>T| |
S23 |
21 | BAA02g06500 | A02 | 2765678 | G | A | upstream_gene_variant | MODIFIER | c.-2294C>T| |
S170 |