Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA02g10640 | A02 | 4736239 | C | T | upstream_gene_variant | MODIFIER | c.-4952C>T| |
S47 |
2 | BAA02g10640 | A02 | 4736701 | C | T | upstream_gene_variant | MODIFIER | c.-4490C>T| |
S211 S227 |
3 | BAA02g10640 | A02 | 4736737 | C | T | upstream_gene_variant | MODIFIER | c.-4454C>T| |
S128 |
4 | BAA02g10640 | A02 | 4736983 | C | T | upstream_gene_variant | MODIFIER | c.-4208C>T| |
S160 |
5 | BAA02g10640 | A02 | 4737664 | C | T | upstream_gene_variant | MODIFIER | c.-3527C>T| |
S240 |
6 | BAA02g10640 | A02 | 4738603 | G | A | upstream_gene_variant | MODIFIER | c.-2588G>A| |
S232 |
7 | BAA02g10640 | A02 | 4739823 | C | T | upstream_gene_variant | MODIFIER | c.-1368C>T| |
S292 |
8 | BAA02g10640 | A02 | 4740328 | C | T | upstream_gene_variant | MODIFIER | c.-863C>T| |
S40 S49 |
9 | BAA02g10640 | A02 | 4740357 | G | A | upstream_gene_variant | MODIFIER | c.-834G>A| |
S198 |
10 | BAA02g10640 | A02 | 4741930 | G | T | intron_variant | MODIFIER | c.628+23G>T| |
S4 |
11 | BAA02g10640 | A02 | 4742087 | C | T | intron_variant | MODIFIER | c.628+180C>T| |
S181 |
12 | BAA02g10640 | A02 | 4744819 | C | T | intron_variant | MODIFIER | c.931-760C>T| |
S218 |
13 | BAA02g10640 | A02 | 4745457 | G | A | intron_variant | MODIFIER | c.931-122G>A| |
S92 |
14 | BAA02g10640 | A02 | 4747402 | C | T | synonymous_variant | LOW | c.2391C>T|p.Gly797Gly |
S128 |
15 | BAA02g10640 | A02 | 4747776 | G | A | intron_variant | MODIFIER | c.2675+90G>A| |
S10 |
16 | BAA02g10640 | A02 | 4748174 | C | T | stop_gained | HIGH | c.2953C>T|p.Gln985* |
S15 S2 S3 S34 S4 S6 |
17 | BAA02g10640 | A02 | 4748610 | C | T | missense_variant | MODERATE | c.3389C>T|p.Thr1130Ile |
S202 |
18 | BAA02g10640 | A02 | 4749230 | G | A | missense_variant | MODERATE | c.3805G>A|p.Gly1269Arg |
S210 S225 |
19 | BAA02g10640 | A02 | 4750852 | C | T | synonymous_variant | LOW | c.4989C>T|p.His1663His |
S104 |
20 | BAA02g10640 | A02 | 4751055 | C | T | missense_variant | MODERATE | c.5192C>T|p.Ser1731Phe |
S129 |
21 | BAA02g10640 | A02 | 4751188 | G | A | synonymous_variant | LOW | c.5325G>A|p.Pro1775Pro |
S162 |
22 | BAA02g10640 | A02 | 4751503 | G | A | synonymous_variant | LOW | c.5640G>A|p.Ala1880Ala |
S197 |
23 | BAA02g10640 | A02 | 4751988 | G | A | downstream_gene_variant | MODIFIER | c.*248G>A| |
S207 |
24 | BAA02g10640 | A02 | 4755886 | G | A | downstream_gene_variant | MODIFIER | c.*4146G>A| |
S98 |
25 | BAA02g10640 | A02 | 4755893 | G | A | downstream_gene_variant | MODIFIER | c.*4153G>A| |
S225 |