Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA02g14950 | A02 | 7107896 | G | A | upstream_gene_variant | MODIFIER | c.-4730G>A| |
S69 |
2 | BAA02g14950 | A02 | 7108470 | C | T | upstream_gene_variant | MODIFIER | c.-4156C>T| |
S131 |
3 | BAA02g14950 | A02 | 7108502 | C | T | upstream_gene_variant | MODIFIER | c.-4124C>T| |
S240 |
4 | BAA02g14950 | A02 | 7109433 | G | A | upstream_gene_variant | MODIFIER | c.-3193G>A| |
S161 |
5 | BAA02g14950 | A02 | 7109633 | C | T | upstream_gene_variant | MODIFIER | c.-2993C>T| |
S195 |
6 | BAA02g14950 | A02 | 7109903 | C | T | upstream_gene_variant | MODIFIER | c.-2723C>T| |
S78 S83 |
7 | BAA02g14950 | A02 | 7109940 | C | T | upstream_gene_variant | MODIFIER | c.-2686C>T| |
S135 |
8 | BAA02g14950 | A02 | 7112676 | C | T | synonymous_variant | LOW | c.51C>T|p.Arg17Arg |
S25 |
9 | BAA02g14950 | A02 | 7112688 | C | T | splice_region_variant&synonymous_variant | LOW | c.63C>T|p.Ala21Ala |
S249 |
10 | BAA02g14950 | A02 | 7113270 | G | A | synonymous_variant | LOW | c.156G>A|p.Arg52Arg |
S157 S166 S257 S263 |
11 | BAA02g14950 | A02 | 7115231 | C | T | synonymous_variant | LOW | c.1057C>T|p.Leu353Leu |
S78 S83 |
12 | BAA02g14950 | A02 | 7115291 | G | A | missense_variant | MODERATE | c.1117G>A|p.Glu373Lys |
S95 |
13 | BAA02g14950 | A02 | 7116107 | C | T | missense_variant | MODERATE | c.1334C>T|p.Thr445Ile |
S273 |
14 | BAA02g14950 | A02 | 7116578 | G | A | synonymous_variant | LOW | c.1638G>A|p.Arg546Arg |
S297 |
15 | BAA02g14950 | A02 | 7116818 | C | T | synonymous_variant | LOW | c.1767C>T|p.Val589Val |
S152 |
16 | BAA02g14950 | A02 | 7117773 | C | T | synonymous_variant | LOW | c.2506C>T|p.Leu836Leu |
S281 |
17 | BAA02g14950 | A02 | 7118036 | G | A | stop_gained | HIGH | c.2769G>A|p.Trp923* |
S111 |
18 | BAA02g14950 | A02 | 7118577 | C | T | missense_variant | MODERATE | c.3061C>T|p.Leu1021Phe |
S33 |
19 | BAA02g14950 | A02 | 7119006 | G | A | synonymous_variant | LOW | c.3375G>A|p.Val1125Val |
S305 |
20 | BAA02g14950 | A02 | 7119007 | C | T | missense_variant | MODERATE | c.3376C>T|p.Leu1126Phe |
S189 |
21 | BAA02g14950 | A02 | 7119119 | G | A | missense_variant | MODERATE | c.3488G>A|p.Ser1163Asn |
S203 |
22 | BAA02g14950 | A02 | 7119372 | G | A | splice_donor_variant&intron_variant | HIGH | c.3601+1G>A| |
S153 S213 |
23 | BAA02g14950 | A02 | 7121592 | G | A | downstream_gene_variant | MODIFIER | c.*1952G>A| |
S132 S215 |