Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA02g27250 | A02 | 15284378 | G | A | downstream_gene_variant | MODIFIER | c.*4629C>T| |
S302 |
2 | BAA02g27250 | A02 | 15284888 | C | T | downstream_gene_variant | MODIFIER | c.*4119G>A| |
S40 S49 |
3 | BAA02g27250 | A02 | 15285025 | C | T | downstream_gene_variant | MODIFIER | c.*3982G>A| |
S42 |
4 | BAA02g27250 | A02 | 15285230 | G | A | downstream_gene_variant | MODIFIER | c.*3777C>T| |
S103 |
5 | BAA02g27250 | A02 | 15285405 | C | T | downstream_gene_variant | MODIFIER | c.*3602G>A| |
S75 S81 |
6 | BAA02g27250 | A02 | 15286324 | G | A | downstream_gene_variant | MODIFIER | c.*2683C>T| |
S263 |
7 | BAA02g27250 | A02 | 15287435 | G | A | downstream_gene_variant | MODIFIER | c.*1572C>T| |
S202 |
8 | BAA02g27250 | A02 | 15287647 | G | A | downstream_gene_variant | MODIFIER | c.*1360C>T| |
S98 |
9 | BAA02g27250 | A02 | 15288570 | C | T | downstream_gene_variant | MODIFIER | c.*437G>A| |
S87 |
10 | BAA02g27250 | A02 | 15288678 | C | T | downstream_gene_variant | MODIFIER | c.*329G>A| |
S66 |
11 | BAA02g27250 | A02 | 15288680 | C | T | downstream_gene_variant | MODIFIER | c.*327G>A| |
S131 |
12 | BAA02g27250 | A02 | 15289015 | G | A | stop_gained | HIGH | c.298C>T|p.Gln100* |
S35 |
13 | BAA02g27250 | A02 | 15289161 | G | A | splice_region_variant&intron_variant | LOW | c.157-5C>T| |
S17 |
14 | BAA02g27250 | A02 | 15289345 | C | T | intron_variant | MODIFIER | c.157-189G>A| |
S15 S2 S4 S6 |
15 | BAA02g27250 | A02 | 15289633 | C | T | synonymous_variant | LOW | c.60G>A|p.Val20Val |
S124 |
16 | BAA02g27250 | A02 | 15289709 | C | T | upstream_gene_variant | MODIFIER | c.-17G>A| |
S266 |
17 | BAA02g27250 | A02 | 15290634 | C | T | upstream_gene_variant | MODIFIER | c.-942G>A| |
S40 S49 |
18 | BAA02g27250 | A02 | 15290803 | G | A | upstream_gene_variant | MODIFIER | c.-1111C>T| |
S125 |
19 | BAA02g27250 | A02 | 15291721 | G | A | upstream_gene_variant | MODIFIER | c.-2029C>T| |
S92 |
20 | BAA02g27250 | A02 | 15293011 | G | A | upstream_gene_variant | MODIFIER | c.-3319C>T| |
S257 |
21 | BAA02g27250 | A02 | 15294199 | G | A | upstream_gene_variant | MODIFIER | c.-4507C>T| |
S229 |
22 | BAA02g27250 | A02 | 15294326 | G | A | upstream_gene_variant | MODIFIER | c.-4634C>T| |
S217 S248 |