Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA02g33640 | A02 | 28775194 | C | T | upstream_gene_variant | MODIFIER | c.-4530C>T| |
S179 |
2 | BAA02g33640 | A02 | 28775225 | C | T | upstream_gene_variant | MODIFIER | c.-4499C>T| |
S249 |
3 | BAA02g33640 | A02 | 28776859 | G | A | upstream_gene_variant | MODIFIER | c.-2865G>A| |
S23 |
4 | BAA02g33640 | A02 | 28777354 | C | T | upstream_gene_variant | MODIFIER | c.-2370C>T| |
S295 |
5 | BAA02g33640 | A02 | 28777567 | C | T | upstream_gene_variant | MODIFIER | c.-2157C>T| |
S25 S264 |
6 | BAA02g33640 | A02 | 28778471 | C | T | upstream_gene_variant | MODIFIER | c.-1253C>T| |
S165 |
7 | BAA02g33640 | A02 | 28778769 | C | T | upstream_gene_variant | MODIFIER | c.-955C>T| |
S1 S90 |
8 | BAA02g33640 | A02 | 28779590 | G | T | upstream_gene_variant | MODIFIER | c.-134G>T| |
S170 S176 |
9 | BAA02g33640 | A02 | 28780042 | G | A | synonymous_variant | LOW | c.204G>A|p.Arg68Arg |
S161 |
10 | BAA02g33640 | A02 | 28780538 | G | A | synonymous_variant | LOW | c.423G>A|p.Lys141Lys |
S275 |
11 | BAA02g33640 | A02 | 28781517 | G | A | splice_acceptor_variant&intron_variant | HIGH | c.993-1G>A| |
S297 |
12 | BAA02g33640 | A02 | 28782823 | G | A | downstream_gene_variant | MODIFIER | c.*301G>A| |
S293 |
13 | BAA02g33640 | A02 | 28782975 | C | T | downstream_gene_variant | MODIFIER | c.*453C>T| |
S33 |
14 | BAA02g33640 | A02 | 28783464 | C | T | downstream_gene_variant | MODIFIER | c.*942C>T| |
S295 |
15 | BAA02g33640 | A02 | 28784929 | C | T | downstream_gene_variant | MODIFIER | c.*2407C>T| |
S303 |
16 | BAA02g33640 | A02 | 28784983 | G | A | downstream_gene_variant | MODIFIER | c.*2461G>A| |
S45 |
17 | BAA02g33640 | A02 | 28785365 | G | A | downstream_gene_variant | MODIFIER | c.*2843G>A| |
S200 |
18 | BAA02g33640 | A02 | 28785419 | C | T | downstream_gene_variant | MODIFIER | c.*2897C>T| |
S54 |