Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA02g42970 | A02 | 35698977 | G | A | upstream_gene_variant | MODIFIER | c.-3724G>A| |
S268 |
2 | BAA02g42970 | A02 | 35700768 | C | T | upstream_gene_variant | MODIFIER | c.-1933C>T| |
S3 |
3 | BAA02g42970 | A02 | 35702030 | C | T | upstream_gene_variant | MODIFIER | c.-671C>T| |
S51 |
4 | BAA02g42970 | A02 | 35702500 | C | T | upstream_gene_variant | MODIFIER | c.-201C>T| |
S210 S225 |
5 | BAA02g42970 | A02 | 35703082 | G | A | intron_variant | MODIFIER | c.81-291G>A| |
S19 |
6 | BAA02g42970 | A02 | 35703256 | G | A | intron_variant | MODIFIER | c.81-117G>A| |
S294 |
7 | BAA02g42970 | A02 | 35703432 | C | T | missense_variant | MODERATE | c.140C>T|p.Ala47Val |
S262 |
8 | BAA02g42970 | A02 | 35703452 | G | A | missense_variant | MODERATE | c.160G>A|p.Glu54Lys |
S224 |
9 | BAA02g42970 | A02 | 35703492 | G | A | missense_variant | MODERATE | c.200G>A|p.Arg67Lys |
S294 |
10 | BAA02g42970 | A02 | 35703941 | C | T | synonymous_variant | LOW | c.399C>T|p.Tyr133Tyr |
S295 |
11 | BAA02g42970 | A02 | 35703981 | G | A | missense_variant | MODERATE | c.439G>A|p.Val147Ile |
S223 |
12 | BAA02g42970 | A02 | 35704025 | G | A | synonymous_variant | LOW | c.483G>A|p.Leu161Leu |
S294 |
13 | BAA02g42970 | A02 | 35704165 | C | T | missense_variant&splice_region_variant | MODERATE | c.535C>T|p.Leu179Phe |
S289 S290 |
14 | BAA02g42970 | A02 | 35705293 | G | A | intron_variant | MODIFIER | c.1203+80G>A| |
S19 |
15 | BAA02g42970 | A02 | 35706691 | C | T | missense_variant | MODERATE | c.1883C>T|p.Ala628Val |
S226 |
16 | BAA02g42970 | A02 | 35707449 | C | T | missense_variant | MODERATE | c.2273C>T|p.Ser758Phe |
S216 |
17 | BAA02g42970 | A02 | 35708677 | G | A | synonymous_variant | LOW | c.2889G>A|p.Thr963Thr |
S56 |
18 | BAA02g42970 | A02 | 35708710 | C | T | synonymous_variant | LOW | c.2922C>T|p.Ile974Ile |
S193 |
19 | BAA02g42970 | A02 | 35709295 | C | T | stop_gained | HIGH | c.3325C>T|p.Gln1109* |
S179 |
20 | BAA02g42970 | A02 | 35709307 | C | T | stop_gained | HIGH | c.3337C>T|p.Gln1113* |
S61 |
21 | BAA02g42970 | A02 | 35709352 | C | T | downstream_gene_variant | MODIFIER | c.*31C>T| |
S144 |
22 | BAA02g42970 | A02 | 35710218 | C | T | downstream_gene_variant | MODIFIER | c.*897C>T| |
S13 |
23 | BAA02g42970 | A02 | 35710813 | G | A | downstream_gene_variant | MODIFIER | c.*1492G>A| |
S81 S85 |
24 | BAA02g42970 | A02 | 35710957 | G | A | downstream_gene_variant | MODIFIER | c.*1636G>A| |
S180 |
25 | BAA02g42970 | A02 | 35711095 | C | T | downstream_gene_variant | MODIFIER | c.*1774C>T| |
S301 S304 |