Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA03g04640 | A03 | 1961681 | C | T | upstream_gene_variant | MODIFIER | c.-3862C>T| |
S202 |
2 | BAA03g04640 | A03 | 1962980 | G | A | upstream_gene_variant | MODIFIER | c.-2563G>A| |
S238 |
3 | BAA03g04640 | A03 | 1963476 | C | T | upstream_gene_variant | MODIFIER | c.-2067C>T| |
S1 S161 S228 S244 S251 S289 S290 S90 |
4 | BAA03g04640 | A03 | 1964296 | A | G | upstream_gene_variant | MODIFIER | c.-1247A>G| |
S40 S49 |
5 | BAA03g04640 | A03 | 1964521 | G | A | upstream_gene_variant | MODIFIER | c.-1022G>A| |
S191 |
6 | BAA03g04640 | A03 | 1964999 | C | T | upstream_gene_variant | MODIFIER | c.-544C>T| |
S259 |
7 | BAA03g04640 | A03 | 1965911 | C | T | synonymous_variant | LOW | c.369C>T|p.Phe123Phe |
S221 |
8 | BAA03g04640 | A03 | 1966052 | G | A | stop_gained | HIGH | c.510G>A|p.Trp170* |
S114 |
9 | BAA03g04640 | A03 | 1966142 | G | A | synonymous_variant | LOW | c.600G>A|p.Lys200Lys |
S294 |
10 | BAA03g04640 | A03 | 1967239 | G | A | synonymous_variant | LOW | c.1095G>A|p.Glu365Glu |
S34 |
11 | BAA03g04640 | A03 | 1967324 | C | T | missense_variant | MODERATE | c.1180C>T|p.Leu394Phe |
S82 S92 |
12 | BAA03g04640 | A03 | 1968525 | G | A | missense_variant | MODERATE | c.1768G>A|p.Glu590Lys |
S119 |
13 | BAA03g04640 | A03 | 1968910 | C | T | missense_variant | MODERATE | c.2153C>T|p.Ser718Phe |
S123 |
14 | BAA03g04640 | A03 | 1969120 | C | T | missense_variant | MODERATE | c.2363C>T|p.Ala788Val |
S48 |