Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA03g21120 | A03 | 9568136 | G | A | upstream_gene_variant | MODIFIER | c.-4297G>A| |
S180 |
2 | BAA03g21120 | A03 | 9569720 | C | T | upstream_gene_variant | MODIFIER | c.-2713C>T| |
S234 |
3 | BAA03g21120 | A03 | 9570749 | C | T | upstream_gene_variant | MODIFIER | c.-1684C>T| |
S155 S211 |
4 | BAA03g21120 | A03 | 9571160 | G | A | upstream_gene_variant | MODIFIER | c.-1273G>A| |
S69 |
5 | BAA03g21120 | A03 | 9571983 | G | A | upstream_gene_variant | MODIFIER | c.-450G>A| |
S289 S290 |
6 | BAA03g21120 | A03 | 9572589 | C | T | stop_gained | HIGH | c.157C>T|p.Gln53* |
S100 |
7 | BAA03g21120 | A03 | 9572651 | G | A | splice_donor_variant&intron_variant | HIGH | c.218+1G>A| |
S192 |
8 | BAA03g21120 | A03 | 9572714 | G | A | splice_region_variant&intron_variant | LOW | c.219-6G>A| |
S210 S225 |
9 | BAA03g21120 | A03 | 9572741 | G | A | synonymous_variant | LOW | c.240G>A|p.Glu80Glu |
S188 |
10 | BAA03g21120 | A03 | 9572743 | T | A | missense_variant | MODERATE | c.242T>A|p.Ile81Asn |
S267 |
11 | BAA03g21120 | A03 | 9574728 | G | A | splice_region_variant&intron_variant | LOW | c.1387-6G>A| |
S245 |
12 | BAA03g21120 | A03 | 9574783 | C | T | missense_variant | MODERATE | c.1436C>T|p.Thr479Met |
S192 |
13 | BAA03g21120 | A03 | 9575015 | G | A | downstream_gene_variant | MODIFIER | c.*14G>A| |
S275 |
14 | BAA03g21120 | A03 | 9575876 | C | T | downstream_gene_variant | MODIFIER | c.*875C>T| |
S1 S161 S289 S290 S90 |
15 | BAA03g21120 | A03 | 9576490 | G | A | downstream_gene_variant | MODIFIER | c.*1489G>A| |
S47 |
16 | BAA03g21120 | A03 | 9577433 | T | C | downstream_gene_variant | MODIFIER | c.*2432T>C| |
S7 |
17 | BAA03g21120 | A03 | 9578809 | C | T | downstream_gene_variant | MODIFIER | c.*3808C>T| |
S302 |