Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA03g40140 | A03 | 18741634 | C | T | upstream_gene_variant | MODIFIER | c.-4455C>T| |
S82 S92 |
2 | BAA03g40140 | A03 | 18741724 | G | A | upstream_gene_variant | MODIFIER | c.-4365G>A| |
S236 |
3 | BAA03g40140 | A03 | 18742129 | G | A | upstream_gene_variant | MODIFIER | c.-3960G>A| |
S23 |
4 | BAA03g40140 | A03 | 18742765 | G | A | upstream_gene_variant | MODIFIER | c.-3324G>A| |
S177 |
5 | BAA03g40140 | A03 | 18742997 | G | A | upstream_gene_variant | MODIFIER | c.-3092G>A| |
S197 |
6 | BAA03g40140 | A03 | 18743017 | C | T | upstream_gene_variant | MODIFIER | c.-3072C>T| |
S32 |
7 | BAA03g40140 | A03 | 18743021 | G | A | upstream_gene_variant | MODIFIER | c.-3068G>A| |
S89 |
8 | BAA03g40140 | A03 | 18746378 | G | A | missense_variant | MODERATE | c.67G>A|p.Gly23Ser |
S36 |
9 | BAA03g40140 | A03 | 18746549 | C | T | missense_variant | MODERATE | c.238C>T|p.Pro80Ser |
S18 |
10 | BAA03g40140 | A03 | 18747572 | G | A | missense_variant | MODERATE | c.712G>A|p.Ala238Thr |
S292 |
11 | BAA03g40140 | A03 | 18747808 | C | T | missense_variant | MODERATE | c.848C>T|p.Ala283Val |
S19 |
12 | BAA03g40140 | A03 | 18747828 | C | T | missense_variant | MODERATE | c.868C>T|p.Arg290Cys |
S240 |
13 | BAA03g40140 | A03 | 18748054 | C | T | synonymous_variant | LOW | c.1006C>T|p.Leu336Leu |
S241 |
14 | BAA03g40140 | A03 | 18748073 | C | T | splice_region_variant&intron_variant | LOW | c.1018+7C>T| |
S283 |
15 | BAA03g40140 | A03 | 18748177 | C | T | splice_region_variant&intron_variant | LOW | c.1019-7C>T| |
S159 S243 |
16 | BAA03g40140 | A03 | 18748575 | G | A | synonymous_variant | LOW | c.1206G>A|p.Gly402Gly |
S36 |
17 | BAA03g40140 | A03 | 18749923 | C | T | synonymous_variant | LOW | c.1768C>T|p.Leu590Leu |
S279 |
18 | BAA03g40140 | A03 | 18750087 | G | A | missense_variant | MODERATE | c.1831G>A|p.Asp611Asn |
S245 |
19 | BAA03g40140 | A03 | 18750489 | C | T | stop_gained | HIGH | c.1981C>T|p.Gln661* |
S34 |