Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA04g00310 | A04 | 174467 | G | A | downstream_gene_variant | MODIFIER | c.*748C>T| |
S244 |
2 | BAA04g00310 | A04 | 175060 | C | T | downstream_gene_variant | MODIFIER | c.*155G>A| |
S301 S304 |
3 | BAA04g00310 | A04 | 175275 | G | T | splice_region_variant&intron_variant | LOW | c.1735-7C>A| |
S239 |
4 | BAA04g00310 | A04 | 175291 | C | T | intron_variant | MODIFIER | c.1735-23G>A| |
S130 |
5 | BAA04g00310 | A04 | 175804 | C | T | missense_variant | MODERATE | c.1267G>A|p.Gly423Arg |
S90 |
6 | BAA04g00310 | A04 | 175948 | G | A | intron_variant | MODIFIER | c.1173-50C>T| |
S245 |
7 | BAA04g00310 | A04 | 176430 | G | A | synonymous_variant | LOW | c.1086C>T|p.Ala362Ala |
S276 |
8 | BAA04g00310 | A04 | 176583 | G | A | synonymous_variant | LOW | c.933C>T|p.Leu311Leu |
S177 |
9 | BAA04g00310 | A04 | 176595 | G | A | synonymous_variant | LOW | c.921C>T|p.Leu307Leu |
S150 |
10 | BAA04g00310 | A04 | 176790 | C | T | stop_gained | HIGH | c.726G>A|p.Trp242* |
S41 |
11 | BAA04g00310 | A04 | 179048 | C | T | synonymous_variant | LOW | c.105G>A|p.Gly35Gly |
S81 S85 |
12 | BAA04g00310 | A04 | 182304 | C | T | upstream_gene_variant | MODIFIER | c.-2667G>A| |
S176 |
13 | BAA04g00310 | A04 | 182765 | C | T | upstream_gene_variant | MODIFIER | c.-3128G>A| |
S291 |