Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA04g01340 | A04 | 772228 | C | T | downstream_gene_variant | MODIFIER | c.*3875G>A| |
S269 |
2 | BAA04g01340 | A04 | 772312 | G | T | downstream_gene_variant | MODIFIER | c.*3791C>A| |
S256 |
3 | BAA04g01340 | A04 | 772369 | C | T | downstream_gene_variant | MODIFIER | c.*3734G>A| |
S255 |
4 | BAA04g01340 | A04 | 772423 | C | T | downstream_gene_variant | MODIFIER | c.*3680G>A| |
S206 S26 |
5 | BAA04g01340 | A04 | 772466 | C | T | downstream_gene_variant | MODIFIER | c.*3637G>A| |
S157 |
6 | BAA04g01340 | A04 | 773360 | G | A | downstream_gene_variant | MODIFIER | c.*2743C>T| |
S4 |
7 | BAA04g01340 | A04 | 774454 | C | T | downstream_gene_variant | MODIFIER | c.*1649G>A| |
S180 |
8 | BAA04g01340 | A04 | 774852 | G | A | downstream_gene_variant | MODIFIER | c.*1251C>T| |
S208 |
9 | BAA04g01340 | A04 | 774971 | G | A | downstream_gene_variant | MODIFIER | c.*1132C>T| |
S225 |
10 | BAA04g01340 | A04 | 776111 | G | A | missense_variant | MODERATE | c.2017C>T|p.His673Tyr |
S138 |
11 | BAA04g01340 | A04 | 776379 | C | T | splice_acceptor_variant&intron_variant | HIGH | c.1750-1G>A| |
S15 S3 |
12 | BAA04g01340 | A04 | 777645 | C | T | synonymous_variant | LOW | c.753G>A|p.Arg251Arg |
S247 |
13 | BAA04g01340 | A04 | 777914 | C | T | missense_variant | MODERATE | c.484G>A|p.Glu162Lys |
S140 |
14 | BAA04g01340 | A04 | 779219 | G | A | upstream_gene_variant | MODIFIER | c.-274C>T| |
S182 |
15 | BAA04g01340 | A04 | 780876 | C | T | upstream_gene_variant | MODIFIER | c.-1931G>A| |
S146 |
16 | BAA04g01340 | A04 | 781601 | G | A | upstream_gene_variant | MODIFIER | c.-2656C>T| |
S67 |
17 | BAA04g01340 | A04 | 782599 | G | A | upstream_gene_variant | MODIFIER | c.-3654C>T| |
S251 |
18 | BAA04g01340 | A04 | 783396 | G | A | upstream_gene_variant | MODIFIER | c.-4451C>T| |
S246 |
19 | BAA04g01340 | A04 | 783529 | C | T | upstream_gene_variant | MODIFIER | c.-4584G>A| |
S272 |