Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA04g02020 | A04 | 1173332 | C | T | downstream_gene_variant | MODIFIER | c.*919G>A| |
S260 |
2 | BAA04g02020 | A04 | 1173708 | C | T | downstream_gene_variant | MODIFIER | c.*543G>A| |
S7 |
3 | BAA04g02020 | A04 | 1173949 | C | T | downstream_gene_variant | MODIFIER | c.*302G>A| |
S157 S163 |
4 | BAA04g02020 | A04 | 1174055 | C | T | downstream_gene_variant | MODIFIER | c.*196G>A| |
S252 |
5 | BAA04g02020 | A04 | 1174436 | G | A | synonymous_variant | LOW | c.1740C>T|p.Cys580Cys |
S272 |
6 | BAA04g02020 | A04 | 1174554 | G | A | intron_variant | MODIFIER | c.1694+15C>T| |
S204 |
7 | BAA04g02020 | A04 | 1174873 | G | A | missense_variant | MODERATE | c.1558C>T|p.Leu520Phe |
S151 |
8 | BAA04g02020 | A04 | 1175433 | C | T | missense_variant | MODERATE | c.1303G>A|p.Ala435Thr |
S289 S290 |
9 | BAA04g02020 | A04 | 1175879 | C | T | splice_region_variant&intron_variant | LOW | c.1101-4G>A| |
S208 S93 |
10 | BAA04g02020 | A04 | 1176956 | C | T | missense_variant&splice_region_variant | MODERATE | c.706G>A|p.Glu236Lys |
S32 |
11 | BAA04g02020 | A04 | 1177962 | G | A | intron_variant | MODIFIER | c.435-267C>T| |
S269 |
12 | BAA04g02020 | A04 | 1178688 | C | T | intron_variant | MODIFIER | c.434+421G>A| |
S81 S85 |
13 | BAA04g02020 | A04 | 1178992 | G | A | intron_variant | MODIFIER | c.434+117C>T| |
S36 |
14 | BAA04g02020 | A04 | 1179201 | C | T | synonymous_variant | LOW | c.342G>A|p.Lys114Lys |
S187 |
15 | BAA04g02020 | A04 | 1179427 | C | T | missense_variant | MODERATE | c.116G>A|p.Arg39Lys |
S159 S299 |
16 | BAA04g02020 | A04 | 1179438 | C | T | synonymous_variant | LOW | c.105G>A|p.Lys35Lys |
S249 |
17 | BAA04g02020 | A04 | 1180556 | C | T | upstream_gene_variant | MODIFIER | c.-1014G>A| |
S130 |
18 | BAA04g02020 | A04 | 1182382 | C | T | upstream_gene_variant | MODIFIER | c.-2840G>A| |
S206 S26 S80 S84 S93 S98 |
19 | BAA04g02020 | A04 | 1182747 | T | A | upstream_gene_variant | MODIFIER | c.-3205A>T| |
S37 |
20 | BAA04g02020 | A04 | 1182987 | G | A | upstream_gene_variant | MODIFIER | c.-3445C>T| |
S66 |
21 | BAA04g02020 | A04 | 1183334 | C | T | upstream_gene_variant | MODIFIER | c.-3792G>A| |
S95 |
22 | BAA04g02020 | A04 | 1183768 | C | T | upstream_gene_variant | MODIFIER | c.-4226G>A| |
S163 |