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Num	GeneID	Chromosome	Position	Ref.allele	Alt.allele	Mutant type	Impacts	Amino acid change	SampleID
1	BAA04g03340	A04	2032163	C	T	downstream_gene_variant	MODIFIER	c.*4818G>A\|	S107
2	BAA04g03340	A04	2033165	G	A	downstream_gene_variant	MODIFIER	c.*3816C>T\|	S170
3	BAA04g03340	A04	2034315	C	T	downstream_gene_variant	MODIFIER	c.*2666G>A\|	S122
4	BAA04g03340	A04	2036220	C	T	downstream_gene_variant	MODIFIER	c.*761G>A\|	S2
5	BAA04g03340	A04	2036388	C	T	downstream_gene_variant	MODIFIER	c.*593G>A\|	S113 S115 S117 S120 S121 S122 S228 S23 S244 S251 S266 S289 S297 S5 S55 S65 S8 S9
6	BAA04g03340	A04	2036489	C	T	downstream_gene_variant	MODIFIER	c.*492G>A\|	S76
7	BAA04g03340	A04	2037272	C	T	start_lost	HIGH	c.3G>A\|p.Met1?	S157 S163
8	BAA04g03340	A04	2038084	G	A	upstream_gene_variant	MODIFIER	c.-810C>T\|	S28
9	BAA04g03340	A04	2038113	C	T	upstream_gene_variant	MODIFIER	c.-839G>A\|	S15 S3
10	BAA04g03340	A04	2038596	G	A	upstream_gene_variant	MODIFIER	c.-1322C>T\|	S54
11	BAA04g03340	A04	2038748	C	T	upstream_gene_variant	MODIFIER	c.-1474G>A\|	S144
12	BAA04g03340	A04	2038916	C	T	upstream_gene_variant	MODIFIER	c.-1642G>A\|	S18
13	BAA04g03340	A04	2039191	G	A	upstream_gene_variant	MODIFIER	c.-1917C>T\|	S282
14	BAA04g03340	A04	2039646	C	T	upstream_gene_variant	MODIFIER	c.-2372G>A\|	S118
15	BAA04g03340	A04	2039765	G	A	upstream_gene_variant	MODIFIER	c.-2491C>T\|	S94
16	BAA04g03340	A04	2040901	C	T	upstream_gene_variant	MODIFIER	c.-3627G>A\|	S246
17	BAA04g03340	A04	2041380	C	T	upstream_gene_variant	MODIFIER	c.-4106G>A\|	S53
18	BAA04g03340	A04	2041452	C	T	upstream_gene_variant	MODIFIER	c.-4178G>A\|	S18
19	BAA04g03340	A04	2041522	C	T	upstream_gene_variant	MODIFIER	c.-4248G>A\|	S46
20	BAA04g03340	A04	2041583	C	T	upstream_gene_variant	MODIFIER	c.-4309G>A\|	S225 S265
21	BAA04g03340	A04	2041638	C	T	upstream_gene_variant	MODIFIER	c.-4364G>A\|	S296

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