Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA04g04730 | A04 | 2978941 | G | A | downstream_gene_variant | MODIFIER | c.*1511C>T| |
S144 |
2 | BAA04g04730 | A04 | 2979182 | G | A | downstream_gene_variant | MODIFIER | c.*1270C>T| |
S201 |
3 | BAA04g04730 | A04 | 2979397 | C | T | downstream_gene_variant | MODIFIER | c.*1055G>A| |
S179 |
4 | BAA04g04730 | A04 | 2980054 | C | T | downstream_gene_variant | MODIFIER | c.*398G>A| |
S179 |
5 | BAA04g04730 | A04 | 2980140 | C | T | downstream_gene_variant | MODIFIER | c.*312G>A| |
S79 S84 |
6 | BAA04g04730 | A04 | 2980514 | G | A | missense_variant | MODERATE | c.1591C>T|p.Pro531Ser |
S239 |
7 | BAA04g04730 | A04 | 2980743 | G | A | intron_variant | MODIFIER | c.1478-116C>T| |
S161 |
8 | BAA04g04730 | A04 | 2981346 | C | T | splice_region_variant&intron_variant | LOW | c.1226+6G>A| |
S55 |
9 | BAA04g04730 | A04 | 2982482 | G | A | intron_variant | MODIFIER | c.824-71C>T| |
S203 |
10 | BAA04g04730 | A04 | 2983722 | C | T | missense_variant&splice_region_variant | MODERATE | c.370G>A|p.Glu124Lys |
S4 |
11 | BAA04g04730 | A04 | 2983747 | C | T | synonymous_variant | LOW | c.345G>A|p.Lys115Lys |
S148 S210 S30 S31 |
12 | BAA04g04730 | A04 | 2983905 | G | A | synonymous_variant | LOW | c.187C>T|p.Leu63Leu |
S87 |
13 | BAA04g04730 | A04 | 2984287 | C | T | upstream_gene_variant | MODIFIER | c.-196G>A| |
S19 |