Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA04g05520 | A04 | 3552149 | G | A | downstream_gene_variant | MODIFIER | c.*2957C>T| |
S245 |
2 | BAA04g05520 | A04 | 3552599 | G | A | downstream_gene_variant | MODIFIER | c.*2507C>T| |
S19 S305 S35 |
3 | BAA04g05520 | A04 | 3553389 | C | T | downstream_gene_variant | MODIFIER | c.*1717G>A| |
S276 |
4 | BAA04g05520 | A04 | 3555340 | C | T | stop_gained | HIGH | c.819G>A|p.Trp273* |
S7 |
5 | BAA04g05520 | A04 | 3555811 | G | A | synonymous_variant | LOW | c.348C>T|p.Ser116Ser |
S62 |
6 | BAA04g05520 | A04 | 3556292 | G | A | missense_variant | MODERATE | c.115C>T|p.Pro39Ser |
S295 |
7 | BAA04g05520 | A04 | 3556384 | C | T | missense_variant | MODERATE | c.23G>A|p.Gly8Glu |
S250 |
8 | BAA04g05520 | A04 | 3558480 | G | A | upstream_gene_variant | MODIFIER | c.-1985C>T| |
S245 |
9 | BAA04g05520 | A04 | 3559847 | G | A | upstream_gene_variant | MODIFIER | c.-3352C>T| |
S133 |
10 | BAA04g05520 | A04 | 3559935 | C | T | upstream_gene_variant | MODIFIER | c.-3440G>A| |
S68 |
11 | BAA04g05520 | A04 | 3560815 | G | A | upstream_gene_variant | MODIFIER | c.-4320C>T| |
S5 |
12 | BAA04g05520 | A04 | 3560817 | G | A | upstream_gene_variant | MODIFIER | c.-4322C>T| |
S13 S140 S168 S279 S64 |
13 | BAA04g05520 | A04 | 3560869 | G | A | upstream_gene_variant | MODIFIER | c.-4374C>T| |
S125 |
14 | BAA04g05520 | A04 | 3561035 | G | A | upstream_gene_variant | MODIFIER | c.-4540C>T| |
S142 |