Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA04g06040 | A04 | 3946242 | G | A | upstream_gene_variant | MODIFIER | c.-4581G>A| |
S151 |
2 | BAA04g06040 | A04 | 3946338 | C | T | upstream_gene_variant | MODIFIER | c.-4485C>T| |
S209 |
3 | BAA04g06040 | A04 | 3946721 | C | T | upstream_gene_variant | MODIFIER | c.-4102C>T| |
S179 |
4 | BAA04g06040 | A04 | 3947160 | C | T | upstream_gene_variant | MODIFIER | c.-3663C>T| |
S186 |
5 | BAA04g06040 | A04 | 3949202 | C | T | upstream_gene_variant | MODIFIER | c.-1621C>T| |
S119 |
6 | BAA04g06040 | A04 | 3949917 | T | A | upstream_gene_variant | MODIFIER | c.-906T>A| |
S202 |
7 | BAA04g06040 | A04 | 3950056 | G | A | upstream_gene_variant | MODIFIER | c.-767G>A| |
S146 |
8 | BAA04g06040 | A04 | 3950840 | C | T | synonymous_variant | LOW | c.18C>T|p.Pro6Pro |
S32 |
9 | BAA04g06040 | A04 | 3951963 | C | T | synonymous_variant | LOW | c.306C>T|p.His102His |
S156 S158 |
10 | BAA04g06040 | A04 | 3952219 | G | A | missense_variant | MODERATE | c.562G>A|p.Glu188Lys |
S217 S248 |
11 | BAA04g06040 | A04 | 3952730 | G | A | missense_variant | MODERATE | c.1073G>A|p.Gly358Glu |
S62 |
12 | BAA04g06040 | A04 | 3952824 | C | T | synonymous_variant | LOW | c.1167C>T|p.Asn389Asn |
S68 |
13 | BAA04g06040 | A04 | 3953484 | G | A | synonymous_variant | LOW | c.1827G>A|p.Pro609Pro |
S133 |
14 | BAA04g06040 | A04 | 3955166 | G | A | downstream_gene_variant | MODIFIER | c.*711G>A| |
S191 |
15 | BAA04g06040 | A04 | 3955245 | G | A | downstream_gene_variant | MODIFIER | c.*790G>A| |
S219 S291 S72 |
16 | BAA04g06040 | A04 | 3955246 | C | T | downstream_gene_variant | MODIFIER | c.*791C>T| |
S18 |
17 | BAA04g06040 | A04 | 3955544 | C | T | downstream_gene_variant | MODIFIER | c.*1089C>T| |
S9 |
18 | BAA04g06040 | A04 | 3956335 | C | T | downstream_gene_variant | MODIFIER | c.*1880C>T| |
S55 |