Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA04g07420 | A04 | 4926421 | G | A | upstream_gene_variant | MODIFIER | c.-1643G>A| |
S244 |
2 | BAA04g07420 | A04 | 4927779 | C | T | upstream_gene_variant | MODIFIER | c.-285C>T| |
S82 S92 |
3 | BAA04g07420 | A04 | 4928010 | G | A | upstream_gene_variant | MODIFIER | c.-54G>A| |
S278 |
4 | BAA04g07420 | A04 | 4928534 | C | T | missense_variant | MODERATE | c.380C>T|p.Ser127Phe |
S172 S217 |
5 | BAA04g07420 | A04 | 4932628 | C | T | splice_region_variant&intron_variant | LOW | c.898-8C>T| |
S252 |
6 | BAA04g07420 | A04 | 4932686 | C | T | synonymous_variant | LOW | c.948C>T|p.Tyr316Tyr |
S296 |
7 | BAA04g07420 | A04 | 4932893 | G | A | missense_variant | MODERATE | c.1076G>A|p.Gly359Glu |
S288 |
8 | BAA04g07420 | A04 | 4934524 | C | T | downstream_gene_variant | MODIFIER | c.*1148C>T| |
S260 |
9 | BAA04g07420 | A04 | 4934682 | G | A | downstream_gene_variant | MODIFIER | c.*1306G>A| |
S280 |
10 | BAA04g07420 | A04 | 4935636 | C | T | downstream_gene_variant | MODIFIER | c.*2260C>T| |
S15 S156 S3 S34 S4 S6 |
11 | BAA04g07420 | A04 | 4935678 | C | T | downstream_gene_variant | MODIFIER | c.*2302C>T| |
S100 |
12 | BAA04g07420 | A04 | 4935828 | G | A | downstream_gene_variant | MODIFIER | c.*2452G>A| |
S36 |
13 | BAA04g07420 | A04 | 4936218 | G | A | downstream_gene_variant | MODIFIER | c.*2842G>A| |
S217 S248 |
14 | BAA04g07420 | A04 | 4936269 | C | T | downstream_gene_variant | MODIFIER | c.*2893C>T| |
S167 |
15 | BAA04g07420 | A04 | 4936342 | C | T | downstream_gene_variant | MODIFIER | c.*2966C>T| |
S189 |
16 | BAA04g07420 | A04 | 4937624 | G | A | downstream_gene_variant | MODIFIER | c.*4248G>A| |
S71 |
17 | BAA04g07420 | A04 | 4937828 | C | T | downstream_gene_variant | MODIFIER | c.*4452C>T| |
S148 S210 |
18 | BAA04g07420 | A04 | 4938264 | C | T | downstream_gene_variant | MODIFIER | c.*4888C>T| |
S20 |