Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA04g08540 | A04 | 5881470 | C | T | upstream_gene_variant | MODIFIER | c.-4839C>T| |
S6 |
2 | BAA04g08540 | A04 | 5882930 | G | A | upstream_gene_variant | MODIFIER | c.-3379G>A| |
S33 |
3 | BAA04g08540 | A04 | 5884400 | G | A | upstream_gene_variant | MODIFIER | c.-1909G>A| |
S255 |
4 | BAA04g08540 | A04 | 5884535 | G | A | upstream_gene_variant | MODIFIER | c.-1774G>A| |
S224 S303 |
5 | BAA04g08540 | A04 | 5885213 | C | T | upstream_gene_variant | MODIFIER | c.-1096C>T| |
S136 |
6 | BAA04g08540 | A04 | 5886075 | G | A | upstream_gene_variant | MODIFIER | c.-234G>A| |
S143 |
7 | BAA04g08540 | A04 | 5886639 | C | T | missense_variant | MODERATE | c.331C>T|p.Pro111Ser |
S296 |
8 | BAA04g08540 | A04 | 5886729 | G | A | missense_variant | MODERATE | c.421G>A|p.Asp141Asn |
S104 S105 S52 |
9 | BAA04g08540 | A04 | 5886753 | C | T | missense_variant | MODERATE | c.445C>T|p.Leu149Phe |
S20 |
10 | BAA04g08540 | A04 | 5886903 | C | T | missense_variant | MODERATE | c.595C>T|p.Pro199Ser |
S247 |
11 | BAA04g08540 | A04 | 5886983 | G | A | synonymous_variant | LOW | c.675G>A|p.Gly225Gly |
S262 |
12 | BAA04g08540 | A04 | 5887108 | C | T | intron_variant | MODIFIER | c.777+23C>T| |
S156 S2 |
13 | BAA04g08540 | A04 | 5887351 | G | A | missense_variant | MODERATE | c.962G>A|p.Arg321Lys |
S241 |
14 | BAA04g08540 | A04 | 5887368 | G | A | missense_variant | MODERATE | c.979G>A|p.Asp327Asn |
S87 |
15 | BAA04g08540 | A04 | 5888081 | C | T | intron_variant | MODIFIER | c.1672+20C>T| |
S247 |
16 | BAA04g08540 | A04 | 5888257 | C | T | intron_variant | MODIFIER | c.1672+196C>T| |
S212 |
17 | BAA04g08540 | A04 | 5888353 | G | A | intron_variant | MODIFIER | c.1672+292G>A| |
S259 |
18 | BAA04g08540 | A04 | 5888645 | G | A | intron_variant | MODIFIER | c.1672+584G>A| |
S282 |
19 | BAA04g08540 | A04 | 5892845 | G | A | synonymous_variant | LOW | c.1752G>A|p.Ser584Ser |
S271 |
20 | BAA04g08540 | A04 | 5893618 | C | T | missense_variant | MODERATE | c.2018C>T|p.Ser673Phe |
S296 |
21 | BAA04g08540 | A04 | 5894421 | G | A | downstream_gene_variant | MODIFIER | c.*748G>A| |
|
22 | BAA04g08540 | A04 | 5894512 | G | A | downstream_gene_variant | MODIFIER | c.*839G>A| |
S71 |
23 | BAA04g08540 | A04 | 5897062 | C | T | downstream_gene_variant | MODIFIER | c.*3389C>T| |
S200 S261 S303 |
24 | BAA04g08540 | A04 | 5898456 | C | A | downstream_gene_variant | MODIFIER | c.*4783C>A| |
S106 S131 S217 S218 S247 S49 S7 |