Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA04g21730 | A04 | 24409038 | G | A | upstream_gene_variant | MODIFIER | c.-4278G>A| |
S275 |
2 | BAA04g21730 | A04 | 24409686 | G | A | upstream_gene_variant | MODIFIER | c.-3630G>A| |
S15 S3 |
3 | BAA04g21730 | A04 | 24410119 | G | A | upstream_gene_variant | MODIFIER | c.-3197G>A| |
S185 |
4 | BAA04g21730 | A04 | 24410260 | G | A | upstream_gene_variant | MODIFIER | c.-3056G>A| |
S56 |
5 | BAA04g21730 | A04 | 24411019 | C | T | upstream_gene_variant | MODIFIER | c.-2297C>T| |
S197 |
6 | BAA04g21730 | A04 | 24411825 | G | A | upstream_gene_variant | MODIFIER | c.-1491G>A| |
S96 |
7 | BAA04g21730 | A04 | 24413551 | C | T | missense_variant | MODERATE | c.236C>T|p.Thr79Ile |
S116 |
8 | BAA04g21730 | A04 | 24413563 | G | A | missense_variant | MODERATE | c.248G>A|p.Arg83Lys |
S251 |
9 | BAA04g21730 | A04 | 24415188 | C | T | stop_gained | HIGH | c.1258C>T|p.Gln420* |
S192 |
10 | BAA04g21730 | A04 | 24415555 | C | T | synonymous_variant | LOW | c.1395C>T|p.Phe465Phe |
S148 |
11 | BAA04g21730 | A04 | 24415714 | C | T | synonymous_variant | LOW | c.1554C>T|p.Cys518Cys |
S210 S225 |
12 | BAA04g21730 | A04 | 24415868 | G | A | missense_variant&splice_region_variant | MODERATE | c.1618G>A|p.Val540Ile |
S190 |
13 | BAA04g21730 | A04 | 24416162 | G | A | missense_variant | MODERATE | c.1912G>A|p.Gly638Arg |
S234 |
14 | BAA04g21730 | A04 | 24417076 | G | A | missense_variant | MODERATE | c.2487G>A|p.Met829Ile |
S146 |
15 | BAA04g21730 | A04 | 24417441 | C | T | missense_variant | MODERATE | c.2779C>T|p.Pro927Ser |
S6 |
16 | BAA04g21730 | A04 | 24418481 | C | T | synonymous_variant | LOW | c.3501C>T|p.Tyr1167Tyr |
S296 |
17 | BAA04g21730 | A04 | 24418685 | G | A | synonymous_variant | LOW | c.3705G>A|p.Arg1235Arg |
S128 |
18 | BAA04g21730 | A04 | 24418948 | C | T | missense_variant | MODERATE | c.3968C>T|p.Ser1323Phe |
S1 S90 |
19 | BAA04g21730 | A04 | 24418991 | C | T | synonymous_variant | LOW | c.4011C>T|p.Leu1337Leu |
S301 S304 |
20 | BAA04g21730 | A04 | 24419213 | C | T | synonymous_variant | LOW | c.4146C>T|p.Gly1382Gly |
S67 |
21 | BAA04g21730 | A04 | 24420298 | G | A | downstream_gene_variant | MODIFIER | c.*941G>A| |
S136 |
22 | BAA04g21730 | A04 | 24423240 | G | A | downstream_gene_variant | MODIFIER | c.*3883G>A| |
S83 S88 |
23 | BAA04g21730 | A04 | 24423503 | C | T | downstream_gene_variant | MODIFIER | c.*4146C>T| |
S95 |
24 | BAA04g21730 | A04 | 24423549 | C | T | downstream_gene_variant | MODIFIER | c.*4192C>T| |
S295 |