Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA05g04610 | A05 | 2216399 | C | T | upstream_gene_variant | MODIFIER | c.-4711C>T| |
S262 |
2 | BAA05g04610 | A05 | 2216919 | C | T | upstream_gene_variant | MODIFIER | c.-4191C>T| |
S50 |
3 | BAA05g04610 | A05 | 2217446 | G | A | upstream_gene_variant | MODIFIER | c.-3664G>A| |
S122 |
4 | BAA05g04610 | A05 | 2219887 | C | T | upstream_gene_variant | MODIFIER | c.-1223C>T| |
S15 S3 |
5 | BAA05g04610 | A05 | 2220321 | G | A | upstream_gene_variant | MODIFIER | c.-789G>A| |
S134 |
6 | BAA05g04610 | A05 | 2221419 | C | T | synonymous_variant | LOW | c.213C>T|p.Tyr71Tyr |
S130 |
7 | BAA05g04610 | A05 | 2223177 | C | T | intron_variant | MODIFIER | c.431-1070C>T| |
S106 S112 S147 S161 S188 S196 S201 S208 S223 S235 S281 S294 S305 S31 S57 S61 S70 S77 S88 |
8 | BAA05g04610 | A05 | 2225432 | C | T | intron_variant | MODIFIER | c.1141-41C>T| |
S240 |
9 | BAA05g04610 | A05 | 2225486 | G | A | stop_gained | HIGH | c.1154G>A|p.Trp385* |
S196 |
10 | BAA05g04610 | A05 | 2225775 | C | T | splice_region_variant&intron_variant | LOW | c.1340+6C>T| |
S169 |
11 | BAA05g04610 | A05 | 2225909 | G | A | missense_variant | MODERATE | c.1346G>A|p.Gly449Glu |
S223 |
12 | BAA05g04610 | A05 | 2226538 | G | A | downstream_gene_variant | MODIFIER | c.*454G>A| |
S157 S163 |