Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA05g08950 | A05 | 4474879 | C | T | upstream_gene_variant | MODIFIER | c.-1904C>T| |
S293 |
2 | BAA05g08950 | A05 | 4475431 | C | T | upstream_gene_variant | MODIFIER | c.-1352C>T| |
S17 |
3 | BAA05g08950 | A05 | 4475956 | G | A | upstream_gene_variant | MODIFIER | c.-827G>A| |
S216 |
4 | BAA05g08950 | A05 | 4476807 | G | A | missense_variant | MODERATE | c.25G>A|p.Asp9Asn |
S262 |
5 | BAA05g08950 | A05 | 4476902 | G | A | synonymous_variant | LOW | c.120G>A|p.Pro40Pro |
S133 |
6 | BAA05g08950 | A05 | 4476986 | G | A | synonymous_variant | LOW | c.204G>A|p.Arg68Arg |
S174 S265 S27 S39 |
7 | BAA05g08950 | A05 | 4476989 | C | T | splice_region_variant&synonymous_variant | LOW | c.207C>T|p.Ile69Ile |
S204 |
8 | BAA05g08950 | A05 | 4478082 | C | T | synonymous_variant | LOW | c.652C>T|p.Leu218Leu |
S65 |
9 | BAA05g08950 | A05 | 4478122 | C | T | missense_variant | MODERATE | c.692C>T|p.Pro231Leu |
S79 S84 |
10 | BAA05g08950 | A05 | 4478948 | C | T | intron_variant | MODIFIER | c.1128+35C>T| |
S128 |
11 | BAA05g08950 | A05 | 4479849 | G | A | stop_gained&splice_region_variant | HIGH | c.1334G>A|p.Trp445* |
S77 |
12 | BAA05g08950 | A05 | 4481046 | G | A | synonymous_variant | LOW | c.1908G>A|p.Lys636Lys |
S45 |
13 | BAA05g08950 | A05 | 4482800 | C | T | intron_variant | MODIFIER | c.2367+127C>T| |
S266 |
14 | BAA05g08950 | A05 | 4483262 | C | T | synonymous_variant | LOW | c.2460C>T|p.Ser820Ser |
S10 |
15 | BAA05g08950 | A05 | 4483942 | C | T | intron_variant | MODIFIER | c.2829+36C>T| |
S167 |
16 | BAA05g08950 | A05 | 4484322 | G | A | intron_variant | MODIFIER | c.2830-304G>A| |
S302 |
17 | BAA05g08950 | A05 | 4484875 | C | T | synonymous_variant | LOW | c.2982C>T|p.Leu994Leu |
S157 |
18 | BAA05g08950 | A05 | 4485326 | G | A | missense_variant | MODERATE | c.3251G>A|p.Gly1084Glu |
S104 S52 |
19 | BAA05g08950 | A05 | 4486425 | G | A | missense_variant | MODERATE | c.3704G>A|p.Gly1235Asp |
S6 |
20 | BAA05g08950 | A05 | 4487079 | G | A | missense_variant | MODERATE | c.3904G>A|p.Glu1302Lys |
S138 |
21 | BAA05g08950 | A05 | 4487128 | G | A | missense_variant | MODERATE | c.3953G>A|p.Gly1318Glu |
S64 |
22 | BAA05g08950 | A05 | 4487647 | C | T | synonymous_variant | LOW | c.4146C>T|p.Arg1382Arg |
S162 |
23 | BAA05g08950 | A05 | 4487836 | G | A | splice_region_variant&intron_variant | LOW | c.4202-4G>A| |
S226 |
24 | BAA05g08950 | A05 | 4487874 | C | T | synonymous_variant | LOW | c.4236C>T|p.Thr1412Thr |
S19 |
25 | BAA05g08950 | A05 | 4488927 | G | A | synonymous_variant | LOW | c.4659G>A|p.Thr1553Thr |
S124 |