Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA05g19840 | A05 | 12010386 | C | T | upstream_gene_variant | MODIFIER | c.-4941C>T| |
S174 |
2 | BAA05g19840 | A05 | 12010477 | G | A | upstream_gene_variant | MODIFIER | c.-4850G>A| |
S208 S219 |
3 | BAA05g19840 | A05 | 12010574 | G | A | upstream_gene_variant | MODIFIER | c.-4753G>A| |
S200 |
4 | BAA05g19840 | A05 | 12010944 | G | A | upstream_gene_variant | MODIFIER | c.-4383G>A| |
S40 S49 |
5 | BAA05g19840 | A05 | 12012317 | C | T | upstream_gene_variant | MODIFIER | c.-3010C>T| |
S111 |
6 | BAA05g19840 | A05 | 12015540 | C | T | synonymous_variant | LOW | c.126C>T|p.Ser42Ser |
S149 |
7 | BAA05g19840 | A05 | 12015933 | G | A | stop_gained | HIGH | c.228G>A|p.Trp76* |
S107 |
8 | BAA05g19840 | A05 | 12016204 | C | T | missense_variant | MODERATE | c.427C>T|p.Pro143Ser |
S177 |
9 | BAA05g19840 | A05 | 12019176 | G | C | missense_variant | MODERATE | c.1162G>C|p.Ala388Pro |
S261 S67 |
10 | BAA05g19840 | A05 | 12019325 | G | A | missense_variant | MODERATE | c.1231G>A|p.Gly411Ser |
S218 |
11 | BAA05g19840 | A05 | 12020230 | C | T | downstream_gene_variant | MODIFIER | c.*533C>T| |
S47 |
12 | BAA05g19840 | A05 | 12020257 | C | T | downstream_gene_variant | MODIFIER | c.*560C>T| |
S140 |
13 | BAA05g19840 | A05 | 12020271 | G | A | downstream_gene_variant | MODIFIER | c.*574G>A| |
S56 |
14 | BAA05g19840 | A05 | 12020633 | G | A | downstream_gene_variant | MODIFIER | c.*936G>A| |
S302 |
15 | BAA05g19840 | A05 | 12020900 | C | T | downstream_gene_variant | MODIFIER | c.*1203C>T| |
S277 |
16 | BAA05g19840 | A05 | 12024108 | G | A | downstream_gene_variant | MODIFIER | c.*4411G>A| |
S80 |