Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA05g21500 | A05 | 17430501 | C | T | upstream_gene_variant | MODIFIER | c.-4788C>T| |
S156 |
2 | BAA05g21500 | A05 | 17430794 | G | A | upstream_gene_variant | MODIFIER | c.-4495G>A| |
S175 S177 |
3 | BAA05g21500 | A05 | 17430981 | T | C | upstream_gene_variant | MODIFIER | c.-4308T>C| |
S81 S85 |
4 | BAA05g21500 | A05 | 17431047 | G | A | upstream_gene_variant | MODIFIER | c.-4242G>A| |
S8 |
5 | BAA05g21500 | A05 | 17431520 | C | T | upstream_gene_variant | MODIFIER | c.-3769C>T| |
S38 |
6 | BAA05g21500 | A05 | 17431710 | C | T | upstream_gene_variant | MODIFIER | c.-3579C>T| |
|
7 | BAA05g21500 | A05 | 17434060 | G | A | upstream_gene_variant | MODIFIER | c.-1229G>A| |
S205 |
8 | BAA05g21500 | A05 | 17434138 | G | A | upstream_gene_variant | MODIFIER | c.-1151G>A| |
S267 |
9 | BAA05g21500 | A05 | 17434367 | G | A | upstream_gene_variant | MODIFIER | c.-922G>A| |
S103 |
10 | BAA05g21500 | A05 | 17434370 | C | T | upstream_gene_variant | MODIFIER | c.-919C>T| |
S270 |
11 | BAA05g21500 | A05 | 17434741 | G | A | upstream_gene_variant | MODIFIER | c.-548G>A| |
S98 |
12 | BAA05g21500 | A05 | 17435001 | C | T | upstream_gene_variant | MODIFIER | c.-288C>T| |
S260 |
13 | BAA05g21500 | A05 | 17435268 | C | T | upstream_gene_variant | MODIFIER | c.-21C>T| |
S14 |
14 | BAA05g21500 | A05 | 17435358 | C | T | missense_variant | MODERATE | c.70C>T|p.His24Tyr |
S169 |
15 | BAA05g21500 | A05 | 17435416 | C | T | missense_variant | MODERATE | c.128C>T|p.Ser43Phe |
S80 |
16 | BAA05g21500 | A05 | 17435450 | C | T | splice_region_variant&synonymous_variant | LOW | c.162C>T|p.Thr54Thr |
S170 S219 S72 |
17 | BAA05g21500 | A05 | 17435480 | G | A | intron_variant | MODIFIER | c.164+28G>A| |
S136 |
18 | BAA05g21500 | A05 | 17435643 | G | A | synonymous_variant | LOW | c.234G>A|p.Pro78Pro |
S255 |
19 | BAA05g21500 | A05 | 17435824 | G | A | intron_variant | MODIFIER | c.309+106G>A| |
S250 |
20 | BAA05g21500 | A05 | 17435971 | G | A | synonymous_variant | LOW | c.336G>A|p.Glu112Glu |
S36 |
21 | BAA05g21500 | A05 | 17436169 | G | A | intron_variant | MODIFIER | c.475-50G>A| |
S256 |
22 | BAA05g21500 | A05 | 17437201 | C | T | downstream_gene_variant | MODIFIER | c.*612C>T| |
S243 S299 |
23 | BAA05g21500 | A05 | 17437252 | C | T | downstream_gene_variant | MODIFIER | c.*663C>T| |
S301 S304 |
24 | BAA05g21500 | A05 | 17441450 | C | T | downstream_gene_variant | MODIFIER | c.*4861C>T| |
S178 |