Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA05g23520 | A05 | 28216490 | C | T | downstream_gene_variant | MODIFIER | c.*1660G>A| |
S8 |
2 | BAA05g23520 | A05 | 28217361 | C | T | downstream_gene_variant | MODIFIER | c.*789G>A| |
S206 S26 |
3 | BAA05g23520 | A05 | 28218540 | C | T | synonymous_variant | LOW | c.588G>A|p.Leu196Leu |
S293 S47 |
4 | BAA05g23520 | A05 | 28218712 | G | A | missense_variant | MODERATE | c.416C>T|p.Thr139Ile |
S279 |
5 | BAA05g23520 | A05 | 28218918 | G | A | missense_variant | MODERATE | c.290C>T|p.Thr97Ile |
S161 |
6 | BAA05g23520 | A05 | 28218939 | C | T | intron_variant | MODIFIER | c.282-13G>A| |
S196 |
7 | BAA05g23520 | A05 | 28219543 | G | A | splice_region_variant&synonymous_variant | LOW | c.132C>T|p.Ser44Ser |
S260 |
8 | BAA05g23520 | A05 | 28219579 | T | C | synonymous_variant | LOW | c.96A>G|p.Lys32Lys |
S116 |
9 | BAA05g23520 | A05 | 28219795 | G | A | upstream_gene_variant | MODIFIER | c.-121C>T| |
S179 |
10 | BAA05g23520 | A05 | 28219805 | G | T | upstream_gene_variant | MODIFIER | c.-131C>A| |
S179 |
11 | BAA05g23520 | A05 | 28220474 | C | T | upstream_gene_variant | MODIFIER | c.-800G>A| |
S37 |
12 | BAA05g23520 | A05 | 28220612 | C | T | upstream_gene_variant | MODIFIER | c.-938G>A| |
S175 |
13 | BAA05g23520 | A05 | 28221250 | G | A | upstream_gene_variant | MODIFIER | c.-1576C>T| |
S219 S72 |
14 | BAA05g23520 | A05 | 28221335 | G | A | upstream_gene_variant | MODIFIER | c.-1661C>T| |
S219 |
15 | BAA05g23520 | A05 | 28221549 | C | T | upstream_gene_variant | MODIFIER | c.-1875G>A| |
S277 |
16 | BAA05g23520 | A05 | 28222700 | G | A | upstream_gene_variant | MODIFIER | c.-3026C>T| |
S55 |