Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA05g29370 | A05 | 32873195 | C | T | downstream_gene_variant | MODIFIER | c.*4698G>A| |
S268 |
2 | BAA05g29370 | A05 | 32873821 | G | A | downstream_gene_variant | MODIFIER | c.*4072C>T| |
S156 |
3 | BAA05g29370 | A05 | 32874467 | G | A | downstream_gene_variant | MODIFIER | c.*3426C>T| |
S84 |
4 | BAA05g29370 | A05 | 32874511 | G | A | downstream_gene_variant | MODIFIER | c.*3382C>T| |
S180 |
5 | BAA05g29370 | A05 | 32875772 | G | A | downstream_gene_variant | MODIFIER | c.*2121C>T| |
S6 |
6 | BAA05g29370 | A05 | 32876173 | G | A | downstream_gene_variant | MODIFIER | c.*1720C>T| |
S305 |
7 | BAA05g29370 | A05 | 32877336 | C | T | downstream_gene_variant | MODIFIER | c.*557G>A| |
S183 S198 |
8 | BAA05g29370 | A05 | 32878692 | C | T | splice_acceptor_variant&intron_variant | HIGH | c.3225-1G>A| |
S108 |
9 | BAA05g29370 | A05 | 32878893 | C | T | missense_variant | MODERATE | c.3139G>A|p.Gly1047Ser |
S2 |
10 | BAA05g29370 | A05 | 32880863 | C | T | missense_variant | MODERATE | c.1936G>A|p.Gly646Arg |
S289 |
11 | BAA05g29370 | A05 | 32881278 | C | T | stop_gained | HIGH | c.1521G>A|p.Trp507* |
S206 S239 S26 |
12 | BAA05g29370 | A05 | 32881306 | G | A | missense_variant | MODERATE | c.1493C>T|p.Ala498Val |
S156 |
13 | BAA05g29370 | A05 | 32881795 | G | A | missense_variant | MODERATE | c.1252C>T|p.His418Tyr |
S104 S52 |
14 | BAA05g29370 | A05 | 32881838 | G | A | synonymous_variant | LOW | c.1209C>T|p.Ala403Ala |
S262 |
15 | BAA05g29370 | A05 | 32882678 | G | A | synonymous_variant | LOW | c.585C>T|p.Leu195Leu |
S77 S82 |
16 | BAA05g29370 | A05 | 32884081 | G | A | upstream_gene_variant | MODIFIER | c.-545C>T| |
S144 |
17 | BAA05g29370 | A05 | 32886556 | C | T | upstream_gene_variant | MODIFIER | c.-3020G>A| |
S259 |
18 | BAA05g29370 | A05 | 32886813 | G | A | upstream_gene_variant | MODIFIER | c.-3277C>T| |
S37 |