Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA07g00680 | A07 | 412709 | G | A | upstream_gene_variant | MODIFIER | c.-601G>A| |
S229 |
2 | BAA07g00680 | A07 | 413214 | C | T | upstream_gene_variant | MODIFIER | c.-96C>T| |
S120 |
3 | BAA07g00680 | A07 | 413468 | C | T | synonymous_variant | LOW | c.159C>T|p.Ser53Ser |
S88 |
4 | BAA07g00680 | A07 | 413588 | C | T | synonymous_variant | LOW | c.279C>T|p.Asp93Asp |
S45 |
5 | BAA07g00680 | A07 | 413789 | G | A | stop_gained | HIGH | c.396G>A|p.Trp132* |
S110 |
6 | BAA07g00680 | A07 | 414007 | G | A | missense_variant | MODERATE | c.527G>A|p.Arg176Lys |
S135 |
7 | BAA07g00680 | A07 | 415407 | G | A | splice_region_variant&synonymous_variant | LOW | c.1128G>A|p.Val376Val |
S159 S243 S299 |
8 | BAA07g00680 | A07 | 416329 | C | T | missense_variant | MODERATE | c.1661C>T|p.Ser554Leu |
S75 S81 |
9 | BAA07g00680 | A07 | 416357 | C | T | synonymous_variant | LOW | c.1689C>T|p.Leu563Leu |
S289 S290 |
10 | BAA07g00680 | A07 | 416389 | C | T | missense_variant | MODERATE | c.1721C>T|p.Ser574Phe |
S113 |
11 | BAA07g00680 | A07 | 417228 | C | T | synonymous_variant | LOW | c.2452C>T|p.Leu818Leu |
S173 |
12 | BAA07g00680 | A07 | 417354 | G | A | missense_variant | MODERATE | c.2578G>A|p.Asp860Asn |
S81 S85 |
13 | BAA07g00680 | A07 | 417389 | C | T | synonymous_variant | LOW | c.2613C>T|p.Ser871Ser |
S46 |
14 | BAA07g00680 | A07 | 417662 | G | A | synonymous_variant | LOW | c.2886G>A|p.Leu962Leu |
S62 |
15 | BAA07g00680 | A07 | 419104 | G | A | synonymous_variant | LOW | c.3837G>A|p.Lys1279Lys |
S135 |