Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA07g03130 | A07 | 2488175 | G | A | upstream_gene_variant | MODIFIER | c.-3160G>A| |
S203 |
2 | BAA07g03130 | A07 | 2488323 | G | A | upstream_gene_variant | MODIFIER | c.-3012G>A| |
S180 |
3 | BAA07g03130 | A07 | 2488986 | G | A | upstream_gene_variant | MODIFIER | c.-2349G>A| |
S67 |
4 | BAA07g03130 | A07 | 2489317 | G | A | upstream_gene_variant | MODIFIER | c.-2018G>A| |
S105 S106 |
5 | BAA07g03130 | A07 | 2489757 | G | A | upstream_gene_variant | MODIFIER | c.-1578G>A| |
S202 |
6 | BAA07g03130 | A07 | 2489897 | G | A | upstream_gene_variant | MODIFIER | c.-1438G>A| |
S251 |
7 | BAA07g03130 | A07 | 2491216 | G | A | upstream_gene_variant | MODIFIER | c.-119G>A| |
S2 |
8 | BAA07g03130 | A07 | 2492836 | C | T | intron_variant | MODIFIER | c.357-661C>T| |
S241 |
9 | BAA07g03130 | A07 | 2494765 | C | T | intron_variant | MODIFIER | c.595-963C>T| |
S52 |
10 | BAA07g03130 | A07 | 2496594 | G | A | intron_variant | MODIFIER | c.976+311G>A| |
S216 |
11 | BAA07g03130 | A07 | 2496950 | G | A | synonymous_variant | LOW | c.999G>A|p.Leu333Leu |
S182 |
12 | BAA07g03130 | A07 | 2496986 | C | T | synonymous_variant | LOW | c.1035C>T|p.Arg345Arg |
S88 |
13 | BAA07g03130 | A07 | 2497081 | C | T | splice_region_variant&intron_variant | LOW | c.1049-4C>T| |
S276 |
14 | BAA07g03130 | A07 | 2497148 | G | A | missense_variant | MODERATE | c.1112G>A|p.Gly371Glu |
S54 |
15 | BAA07g03130 | A07 | 2497256 | G | A | missense_variant | MODERATE | c.1220G>A|p.Ser407Asn |
S135 |
16 | BAA07g03130 | A07 | 2497345 | G | A | missense_variant | MODERATE | c.1309G>A|p.Gly437Arg |
S105 S106 |
17 | BAA07g03130 | A07 | 2497418 | C | T | missense_variant | MODERATE | c.1382C>T|p.Thr461Ile |
S178 |
18 | BAA07g03130 | A07 | 2497449 | G | A | synonymous_variant | LOW | c.1413G>A|p.Glu471Glu |
S265 S27 S39 |
19 | BAA07g03130 | A07 | 2498009 | G | A | missense_variant | MODERATE | c.1973G>A|p.Ser658Asn |
S273 |
20 | BAA07g03130 | A07 | 2498053 | C | T | missense_variant | MODERATE | c.2017C>T|p.Pro673Ser |
S126 |
21 | BAA07g03130 | A07 | 2499385 | G | A | missense_variant | MODERATE | c.2992G>A|p.Ala998Thr |
S223 |
22 | BAA07g03130 | A07 | 2499521 | C | T | missense_variant | MODERATE | c.3128C>T|p.Pro1043Leu |
S53 |
23 | BAA07g03130 | A07 | 2500081 | C | T | downstream_gene_variant | MODIFIER | c.*145C>T| |
S6 |
24 | BAA07g03130 | A07 | 2500345 | T | A | downstream_gene_variant | MODIFIER | c.*409T>A| |
S279 |
25 | BAA07g03130 | A07 | 2500388 | G | A | downstream_gene_variant | MODIFIER | c.*452G>A| |
S44 |