Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA07g03590 | A07 | 2920727 | G | A | upstream_gene_variant | MODIFIER | c.-4832G>A| |
S54 |
2 | BAA07g03590 | A07 | 2920944 | G | A | upstream_gene_variant | MODIFIER | c.-4615G>A| |
S19 |
3 | BAA07g03590 | A07 | 2921194 | C | T | upstream_gene_variant | MODIFIER | c.-4365C>T| |
S249 S82 S92 |
4 | BAA07g03590 | A07 | 2921198 | C | T | upstream_gene_variant | MODIFIER | c.-4361C>T| |
S259 |
5 | BAA07g03590 | A07 | 2921501 | C | T | upstream_gene_variant | MODIFIER | c.-4058C>T| |
S297 |
6 | BAA07g03590 | A07 | 2922313 | G | A | upstream_gene_variant | MODIFIER | c.-3246G>A| |
S78 |
7 | BAA07g03590 | A07 | 2922457 | G | A | upstream_gene_variant | MODIFIER | c.-3102G>A| |
S19 |
8 | BAA07g03590 | A07 | 2923135 | C | T | upstream_gene_variant | MODIFIER | c.-2424C>T| |
S213 |
9 | BAA07g03590 | A07 | 2923382 | C | T | upstream_gene_variant | MODIFIER | c.-2177C>T| |
S142 |
10 | BAA07g03590 | A07 | 2923468 | G | A | upstream_gene_variant | MODIFIER | c.-2091G>A| |
S46 |
11 | BAA07g03590 | A07 | 2923799 | T | G | upstream_gene_variant | MODIFIER | c.-1760T>G| |
S206 |
12 | BAA07g03590 | A07 | 2923935 | C | T | upstream_gene_variant | MODIFIER | c.-1624C>T| |
S267 |
13 | BAA07g03590 | A07 | 2924534 | C | T | upstream_gene_variant | MODIFIER | c.-1025C>T| |
S280 |
14 | BAA07g03590 | A07 | 2926044 | C | T | synonymous_variant | LOW | c.417C>T|p.Phe139Phe |
S276 |
15 | BAA07g03590 | A07 | 2926426 | G | A | missense_variant | MODERATE | c.799G>A|p.Ala267Thr |
S245 |
16 | BAA07g03590 | A07 | 2926955 | G | A | missense_variant | MODERATE | c.1043G>A|p.Gly348Asp |
S179 |
17 | BAA07g03590 | A07 | 2927032 | C | T | missense_variant | MODERATE | c.1120C>T|p.Pro374Ser |
S35 |
18 | BAA07g03590 | A07 | 2927049 | G | A | synonymous_variant | LOW | c.1137G>A|p.Leu379Leu |
S76 |
19 | BAA07g03590 | A07 | 2927110 | C | T | stop_gained | HIGH | c.1198C>T|p.Gln400* |
S64 |
20 | BAA07g03590 | A07 | 2931430 | G | A | downstream_gene_variant | MODIFIER | c.*3009G>A| |
S298 |
21 | BAA07g03590 | A07 | 2932450 | G | A | downstream_gene_variant | MODIFIER | c.*4029G>A| |
S33 |
22 | BAA07g03590 | A07 | 2932507 | G | A | downstream_gene_variant | MODIFIER | c.*4086G>A| |
S159 S243 S299 |
23 | BAA07g03590 | A07 | 2933249 | G | A | downstream_gene_variant | MODIFIER | c.*4828G>A| |
S209 |