Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA07g24190 | A07 | 27630124 | C | T | upstream_gene_variant | MODIFIER | c.-4492C>T| |
S200 |
2 | BAA07g24190 | A07 | 27630173 | G | A | upstream_gene_variant | MODIFIER | c.-4443G>A| |
S198 |
3 | BAA07g24190 | A07 | 27630359 | G | T | upstream_gene_variant | MODIFIER | c.-4257G>T| |
S235 |
4 | BAA07g24190 | A07 | 27630690 | G | A | upstream_gene_variant | MODIFIER | c.-3926G>A| |
S23 |
5 | BAA07g24190 | A07 | 27631434 | C | T | upstream_gene_variant | MODIFIER | c.-3182C>T| |
S167 S257 S262 S263 |
6 | BAA07g24190 | A07 | 27633100 | G | A | upstream_gene_variant | MODIFIER | c.-1516G>A| |
S294 |
7 | BAA07g24190 | A07 | 27633500 | G | A | upstream_gene_variant | MODIFIER | c.-1116G>A| |
S267 S268 S269 |
8 | BAA07g24190 | A07 | 27633823 | G | A | upstream_gene_variant | MODIFIER | c.-793G>A| |
S296 |
9 | BAA07g24190 | A07 | 27635456 | C | T | synonymous_variant | LOW | c.493C>T|p.Leu165Leu |
S66 |
10 | BAA07g24190 | A07 | 27636031 | G | A | stop_gained | HIGH | c.819G>A|p.Trp273* |
S111 |
11 | BAA07g24190 | A07 | 27637012 | G | A | missense_variant | MODERATE | c.1615G>A|p.Glu539Lys |
S256 |
12 | BAA07g24190 | A07 | 27637585 | G | A | missense_variant | MODERATE | c.2092G>A|p.Val698Ile |
S223 |
13 | BAA07g24190 | A07 | 27638124 | G | A | missense_variant | MODERATE | c.2557G>A|p.Glu853Lys |
S183 S198 |
14 | BAA07g24190 | A07 | 27639305 | G | C | intron_variant | MODIFIER | c.2812-117G>C| |
S107 |
15 | BAA07g24190 | A07 | 27639591 | G | A | missense_variant | MODERATE | c.2981G>A|p.Gly994Glu |
S33 |
16 | BAA07g24190 | A07 | 27639870 | G | A | intron_variant | MODIFIER | c.3075+185G>A| |
S28 |
17 | BAA07g24190 | A07 | 27640158 | G | A | intron_variant | MODIFIER | c.3076-232G>A| |
S1 S161 S228 S251 S289 S290 S305 S35 S90 |
18 | BAA07g24190 | A07 | 27640926 | C | T | missense_variant | MODERATE | c.3535C>T|p.Leu1179Phe |
S189 |
19 | BAA07g24190 | A07 | 27641071 | G | A | missense_variant | MODERATE | c.3680G>A|p.Gly1227Asp |
S240 |
20 | BAA07g24190 | A07 | 27641261 | G | A | downstream_gene_variant | MODIFIER | c.*147G>A| |
S157 |
21 | BAA07g24190 | A07 | 27641487 | C | T | downstream_gene_variant | MODIFIER | c.*373C>T| |
S196 |
22 | BAA07g24190 | A07 | 27642213 | G | A | downstream_gene_variant | MODIFIER | c.*1099G>A| |
S282 |
23 | BAA07g24190 | A07 | 27642598 | G | A | downstream_gene_variant | MODIFIER | c.*1484G>A| |
S105 S106 |