Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA08g02340 | A08 | 1668428 | C | T | upstream_gene_variant | MODIFIER | c.-3454C>T| |
S99 |
2 | BAA08g02340 | A08 | 1668683 | C | T | upstream_gene_variant | MODIFIER | c.-3199C>T| |
S275 |
3 | BAA08g02340 | A08 | 1669219 | C | T | upstream_gene_variant | MODIFIER | c.-2663C>T| |
S86 |
4 | BAA08g02340 | A08 | 1669429 | A | T | upstream_gene_variant | MODIFIER | c.-2453A>T| |
S61 |
5 | BAA08g02340 | A08 | 1669631 | C | T | upstream_gene_variant | MODIFIER | c.-2251C>T| |
S134 |
6 | BAA08g02340 | A08 | 1669807 | G | A | upstream_gene_variant | MODIFIER | c.-2075G>A| |
S262 |
7 | BAA08g02340 | A08 | 1670085 | C | T | upstream_gene_variant | MODIFIER | c.-1797C>T| |
S43 |
8 | BAA08g02340 | A08 | 1672086 | G | A | splice_region_variant&intron_variant | LOW | c.198+7G>A| |
S194 |
9 | BAA08g02340 | A08 | 1672939 | C | T | missense_variant | MODERATE | c.892C>T|p.Pro298Ser |
S39 |
10 | BAA08g02340 | A08 | 1673293 | G | A | missense_variant | MODERATE | c.1148G>A|p.Gly383Asp |
S190 |
11 | BAA08g02340 | A08 | 1673390 | G | A | synonymous_variant | LOW | c.1245G>A|p.Glu415Glu |
S234 |
12 | BAA08g02340 | A08 | 1673902 | C | T | synonymous_variant | LOW | c.1674C>T|p.Leu558Leu |
S230 |
13 | BAA08g02340 | A08 | 1673911 | G | A | synonymous_variant | LOW | c.1683G>A|p.Lys561Lys |
S32 |
14 | BAA08g02340 | A08 | 1674033 | G | A | missense_variant | MODERATE | c.1805G>A|p.Gly602Glu |
S16 |
15 | BAA08g02340 | A08 | 1675143 | C | T | synonymous_variant | LOW | c.2544C>T|p.Ser848Ser |
S208 |
16 | BAA08g02340 | A08 | 1676259 | G | A | downstream_gene_variant | MODIFIER | c.*483G>A| |
S181 |
17 | BAA08g02340 | A08 | 1677420 | G | A | downstream_gene_variant | MODIFIER | c.*1644G>A| |
S297 |
18 | BAA08g02340 | A08 | 1677811 | G | A | downstream_gene_variant | MODIFIER | c.*2035G>A| |
S130 S193 |
19 | BAA08g02340 | A08 | 1677999 | G | A | downstream_gene_variant | MODIFIER | c.*2223G>A| |
S217 S248 |
20 | BAA08g02340 | A08 | 1678082 | C | T | downstream_gene_variant | MODIFIER | c.*2306C>T| |
S291 |
21 | BAA08g02340 | A08 | 1678212 | C | T | downstream_gene_variant | MODIFIER | c.*2436C>T| |
S180 |
22 | BAA08g02340 | A08 | 1678233 | C | T | downstream_gene_variant | MODIFIER | c.*2457C>T| |
S133 |
23 | BAA08g02340 | A08 | 1678520 | G | A | downstream_gene_variant | MODIFIER | c.*2744G>A| |
S40 S49 |
24 | BAA08g02340 | A08 | 1678666 | G | A | downstream_gene_variant | MODIFIER | c.*2890G>A| |
S281 |
25 | BAA08g02340 | A08 | 1679257 | G | A | downstream_gene_variant | MODIFIER | c.*3481G>A| |
S109 |