Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA08g06930 | A08 | 5682674 | C | T | upstream_gene_variant | MODIFIER | c.-744C>T| |
S70 |
2 | BAA08g06930 | A08 | 5683143 | C | T | upstream_gene_variant | MODIFIER | c.-275C>T| |
S46 |
3 | BAA08g06930 | A08 | 5683188 | G | A | upstream_gene_variant | MODIFIER | c.-230G>A| |
S67 |
4 | BAA08g06930 | A08 | 5683201 | G | A | upstream_gene_variant | MODIFIER | c.-217G>A| |
S181 |
5 | BAA08g06930 | A08 | 5683631 | G | A | missense_variant | MODERATE | c.214G>A|p.Ala72Thr |
S186 |
6 | BAA08g06930 | A08 | 5683720 | C | T | synonymous_variant | LOW | c.246C>T|p.Phe82Phe |
S216 |
7 | BAA08g06930 | A08 | 5683783 | G | A | synonymous_variant | LOW | c.309G>A|p.Thr103Thr |
S125 |
8 | BAA08g06930 | A08 | 5684071 | G | A | splice_region_variant&synonymous_variant | LOW | c.597G>A|p.Glu199Glu |
S32 |
9 | BAA08g06930 | A08 | 5684517 | G | A | synonymous_variant | LOW | c.771G>A|p.Arg257Arg |
S282 |
10 | BAA08g06930 | A08 | 5684531 | G | A | missense_variant | MODERATE | c.785G>A|p.Gly262Glu |
S107 |
11 | BAA08g06930 | A08 | 5687217 | G | A | downstream_gene_variant | MODIFIER | c.*2589G>A| |
S188 S243 S299 |
12 | BAA08g06930 | A08 | 5687218 | G | A | downstream_gene_variant | MODIFIER | c.*2590G>A| |
S37 |
13 | BAA08g06930 | A08 | 5689500 | C | T | downstream_gene_variant | MODIFIER | c.*4872C>T| |
S44 |
14 | BAA08g06930 | A08 | 5689546 | C | T | downstream_gene_variant | MODIFIER | c.*4918C>T| |
S132 S137 S89 |