Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA08g19710 | A08 | 15449702 | C | T | upstream_gene_variant | MODIFIER | c.-2292C>T| |
S113 |
2 | BAA08g19710 | A08 | 15449875 | C | T | upstream_gene_variant | MODIFIER | c.-2119C>T| |
S172 |
3 | BAA08g19710 | A08 | 15450321 | C | T | upstream_gene_variant | MODIFIER | c.-1673C>T| |
S1 S90 |
4 | BAA08g19710 | A08 | 15450693 | G | A | upstream_gene_variant | MODIFIER | c.-1301G>A| |
S109 |
5 | BAA08g19710 | A08 | 15450824 | G | A | upstream_gene_variant | MODIFIER | c.-1170G>A| |
S100 |
6 | BAA08g19710 | A08 | 15451070 | C | T | upstream_gene_variant | MODIFIER | c.-924C>T| |
S83 S88 |
7 | BAA08g19710 | A08 | 15451779 | G | A | upstream_gene_variant | MODIFIER | c.-215G>A| |
S37 |
8 | BAA08g19710 | A08 | 15451842 | C | T | upstream_gene_variant | MODIFIER | c.-152C>T| |
S39 |
9 | BAA08g19710 | A08 | 15451990 | C | T | upstream_gene_variant | MODIFIER | c.-4C>T| |
S105 S106 |
10 | BAA08g19710 | A08 | 15452451 | G | A | stop_gained | HIGH | c.458G>A|p.Trp153* |
S16 |
11 | BAA08g19710 | A08 | 15452458 | C | T | synonymous_variant | LOW | c.465C>T|p.Ser155Ser |
S185 |
12 | BAA08g19710 | A08 | 15452503 | G | A | synonymous_variant | LOW | c.510G>A|p.Arg170Arg |
S87 |
13 | BAA08g19710 | A08 | 15452809 | G | A | synonymous_variant | LOW | c.816G>A|p.Arg272Arg |
S280 |
14 | BAA08g19710 | A08 | 15454361 | C | T | missense_variant | MODERATE | c.1643C>T|p.Ser548Phe |
S71 |
15 | BAA08g19710 | A08 | 15454400 | G | A | missense_variant | MODERATE | c.1682G>A|p.Arg561His |
S178 |
16 | BAA08g19710 | A08 | 15454838 | G | A | missense_variant | MODERATE | c.2120G>A|p.Gly707Glu |
S85 |
17 | BAA08g19710 | A08 | 15455339 | G | A | intron_variant | MODIFIER | c.2277+344G>A| |
S301 S304 |
18 | BAA08g19710 | A08 | 15458499 | G | A | stop_gained | HIGH | c.2706G>A|p.Trp902* |
S205 |
19 | BAA08g19710 | A08 | 15459171 | G | A | synonymous_variant | LOW | c.3087G>A|p.Gly1029Gly |
S179 |
20 | BAA08g19710 | A08 | 15459234 | C | T | synonymous_variant | LOW | c.3150C>T|p.Pro1050Pro |
S135 |