Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA09g03840 | A09 | 2275876 | G | A | downstream_gene_variant | MODIFIER | c.*2971C>T| |
S241 |
2 | BAA09g03840 | A09 | 2275920 | G | A | downstream_gene_variant | MODIFIER | c.*2927C>T| |
S173 |
3 | BAA09g03840 | A09 | 2276933 | G | A | downstream_gene_variant | MODIFIER | c.*1914C>T| |
S129 |
4 | BAA09g03840 | A09 | 2278945 | C | T | missense_variant | MODERATE | c.3661G>A|p.Asp1221Asn |
S120 |
5 | BAA09g03840 | A09 | 2279620 | C | T | missense_variant | MODERATE | c.2986G>A|p.Asp996Asn |
|
6 | BAA09g03840 | A09 | 2279825 | G | A | synonymous_variant | LOW | c.2781C>T|p.Ser927Ser |
S201 |
7 | BAA09g03840 | A09 | 2280787 | G | A | intron_variant | MODIFIER | c.2550+526C>T| |
S174 S216 S27 S39 |
8 | BAA09g03840 | A09 | 2281151 | G | A | intron_variant | MODIFIER | c.2550+162C>T| |
S203 |
9 | BAA09g03840 | A09 | 2281844 | C | T | missense_variant | MODERATE | c.2124G>A|p.Met708Ile |
S62 |
10 | BAA09g03840 | A09 | 2282751 | C | T | intron_variant | MODIFIER | c.1264+34G>A| |
S177 |
11 | BAA09g03840 | A09 | 2284312 | C | T | missense_variant | MODERATE | c.419G>A|p.Arg140Lys |
S54 |
12 | BAA09g03840 | A09 | 2285566 | G | A | synonymous_variant | LOW | c.177C>T|p.Phe59Phe |
S182 |
13 | BAA09g03840 | A09 | 2285656 | G | A | synonymous_variant | LOW | c.87C>T|p.Leu29Leu |
S283 |
14 | BAA09g03840 | A09 | 2285915 | C | T | upstream_gene_variant | MODIFIER | c.-173G>A| |
S104 S52 |
15 | BAA09g03840 | A09 | 2286097 | C | T | upstream_gene_variant | MODIFIER | c.-355G>A| |
S62 |
16 | BAA09g03840 | A09 | 2287425 | G | A | upstream_gene_variant | MODIFIER | c.-1683C>T| |
S17 |
17 | BAA09g03840 | A09 | 2290211 | G | A | upstream_gene_variant | MODIFIER | c.-4469C>T| |
S293 |
18 | BAA09g03840 | A09 | 2290508 | C | T | upstream_gene_variant | MODIFIER | c.-4766G>A| |
S288 |