Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA09g10680 | A09 | 5857008 | C | T | downstream_gene_variant | MODIFIER | c.*4670G>A| |
S132 S215 S89 |
2 | BAA09g10680 | A09 | 5857266 | G | A | downstream_gene_variant | MODIFIER | c.*4412C>T| |
S192 |
3 | BAA09g10680 | A09 | 5858098 | G | A | downstream_gene_variant | MODIFIER | c.*3580C>T| |
S170 |
4 | BAA09g10680 | A09 | 5858141 | G | A | downstream_gene_variant | MODIFIER | c.*3537C>T| |
S260 |
5 | BAA09g10680 | A09 | 5859412 | G | A | downstream_gene_variant | MODIFIER | c.*2266C>T| |
S163 |
6 | BAA09g10680 | A09 | 5861349 | C | T | downstream_gene_variant | MODIFIER | c.*329G>A| |
S294 |
7 | BAA09g10680 | A09 | 5861673 | C | T | downstream_gene_variant | MODIFIER | c.*5G>A| |
S120 |
8 | BAA09g10680 | A09 | 5861807 | C | T | synonymous_variant | LOW | c.369G>A|p.Thr123Thr |
S174 |
9 | BAA09g10680 | A09 | 5861935 | G | A | splice_region_variant&intron_variant | LOW | c.330+8C>T| |
S11 |
10 | BAA09g10680 | A09 | 5861943 | C | T | splice_region_variant&synonymous_variant | LOW | c.330G>A|p.Gln110Gln |
S263 |
11 | BAA09g10680 | A09 | 5862739 | C | T | upstream_gene_variant | MODIFIER | c.-276G>A| |
S155 |
12 | BAA09g10680 | A09 | 5863737 | G | A | upstream_gene_variant | MODIFIER | c.-1274C>T| |
S72 S78 |
13 | BAA09g10680 | A09 | 5864000 | G | A | upstream_gene_variant | MODIFIER | c.-1537C>T| |
S192 |
14 | BAA09g10680 | A09 | 5864850 | G | A | upstream_gene_variant | MODIFIER | c.-2387C>T| |
S223 |
15 | BAA09g10680 | A09 | 5865016 | G | A | upstream_gene_variant | MODIFIER | c.-2553C>T| |
S267 |
16 | BAA09g10680 | A09 | 5866639 | G | A | upstream_gene_variant | MODIFIER | c.-4176C>T| |
S290 |
17 | BAA09g10680 | A09 | 5866762 | G | A | upstream_gene_variant | MODIFIER | c.-4299C>T| |
S4 |