Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA09g34140 | A09 | 42634084 | C | T | upstream_gene_variant | MODIFIER | c.-4813C>T| |
S229 |
2 | BAA09g34140 | A09 | 42634089 | G | A | upstream_gene_variant | MODIFIER | c.-4808G>A| |
S266 |
3 | BAA09g34140 | A09 | 42637057 | G | A | upstream_gene_variant | MODIFIER | c.-1840G>A| |
S172 |
4 | BAA09g34140 | A09 | 42638926 | G | A | synonymous_variant | LOW | c.30G>A|p.Thr10Thr |
S177 |
5 | BAA09g34140 | A09 | 42639055 | C | T | synonymous_variant | LOW | c.159C>T|p.Leu53Leu |
S211 S227 |
6 | BAA09g34140 | A09 | 42639840 | G | A | stop_gained | HIGH | c.723G>A|p.Trp241* |
S11 |
7 | BAA09g34140 | A09 | 42640150 | C | T | missense_variant | MODERATE | c.904C>T|p.Pro302Ser |
S123 |
8 | BAA09g34140 | A09 | 42640845 | C | T | downstream_gene_variant | MODIFIER | c.*645C>T| |
S192 |
9 | BAA09g34140 | A09 | 42640962 | C | T | downstream_gene_variant | MODIFIER | c.*762C>T| |
S193 |
10 | BAA09g34140 | A09 | 42642020 | C | T | downstream_gene_variant | MODIFIER | c.*1820C>T| |
S161 S244 S289 S290 |
11 | BAA09g34140 | A09 | 42642100 | G | A | downstream_gene_variant | MODIFIER | c.*1900G>A| |
S281 |
12 | BAA09g34140 | A09 | 42642259 | C | T | downstream_gene_variant | MODIFIER | c.*2059C>T| |
S161 S244 S289 S290 S4 |
13 | BAA09g34140 | A09 | 42642652 | C | T | downstream_gene_variant | MODIFIER | c.*2452C>T| |
S241 |
14 | BAA09g34140 | A09 | 42643886 | G | A | downstream_gene_variant | MODIFIER | c.*3686G>A| |
S200 |
15 | BAA09g34140 | A09 | 42643894 | C | T | downstream_gene_variant | MODIFIER | c.*3694C>T| |
S186 S241 |
16 | BAA09g34140 | A09 | 42645010 | C | T | downstream_gene_variant | MODIFIER | c.*4810C>T| |
S280 |