Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA09g41040 | A09 | 47912610 | G | A | downstream_gene_variant | MODIFIER | c.*2281C>T| |
S98 |
2 | BAA09g41040 | A09 | 47912614 | G | A | downstream_gene_variant | MODIFIER | c.*2277C>T| |
S291 |
3 | BAA09g41040 | A09 | 47912867 | C | T | downstream_gene_variant | MODIFIER | c.*2024G>A| |
S82 S92 |
4 | BAA09g41040 | A09 | 47913253 | C | T | downstream_gene_variant | MODIFIER | c.*1638G>A| |
S230 |
5 | BAA09g41040 | A09 | 47915209 | G | A | synonymous_variant | LOW | c.348C>T|p.Leu116Leu |
S178 |
6 | BAA09g41040 | A09 | 47915367 | G | A | missense_variant&splice_region_variant | MODERATE | c.289C>T|p.Pro97Ser |
S270 |
7 | BAA09g41040 | A09 | 47915555 | G | A | missense_variant | MODERATE | c.101C>T|p.Ser34Phe |
S239 |
8 | BAA09g41040 | A09 | 47915916 | C | T | upstream_gene_variant | MODIFIER | c.-261G>A| |
S139 |
9 | BAA09g41040 | A09 | 47917304 | G | A | upstream_gene_variant | MODIFIER | c.-1649C>T| |
S67 |
10 | BAA09g41040 | A09 | 47917527 | G | A | upstream_gene_variant | MODIFIER | c.-1872C>T| |
S172 |
11 | BAA09g41040 | A09 | 47918205 | C | T | upstream_gene_variant | MODIFIER | c.-2550G>A| |
S100 |
12 | BAA09g41040 | A09 | 47918447 | G | A | upstream_gene_variant | MODIFIER | c.-2792C>T| |
S262 |
13 | BAA09g41040 | A09 | 47918672 | G | A | upstream_gene_variant | MODIFIER | c.-3017C>T| |
S135 |
14 | BAA09g41040 | A09 | 47918818 | G | A | upstream_gene_variant | MODIFIER | c.-3163C>T| |
S159 S187 S188 S243 S276 S299 |
15 | BAA09g41040 | A09 | 47919207 | C | T | upstream_gene_variant | MODIFIER | c.-3552G>A| |
S235 |
16 | BAA09g41040 | A09 | 47919756 | C | T | upstream_gene_variant | MODIFIER | c.-4101G>A| |
S205 |
17 | BAA09g41040 | A09 | 47920054 | C | T | upstream_gene_variant | MODIFIER | c.-4399G>A| |
S210 S225 |
18 | BAA09g41040 | A09 | 47920463 | G | A | upstream_gene_variant | MODIFIER | c.-4808C>T| |
S11 |