Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA10g08160 | A10 | 5555879 | G | A | upstream_gene_variant | MODIFIER | c.-4989G>A| |
S85 |
2 | BAA10g08160 | A10 | 5555898 | G | A | upstream_gene_variant | MODIFIER | c.-4970G>A| |
S208 S219 |
3 | BAA10g08160 | A10 | 5556138 | C | T | upstream_gene_variant | MODIFIER | c.-4730C>T| |
S155 S211 |
4 | BAA10g08160 | A10 | 5556144 | G | A | upstream_gene_variant | MODIFIER | c.-4724G>A| |
S25 |
5 | BAA10g08160 | A10 | 5556298 | G | A | upstream_gene_variant | MODIFIER | c.-4570G>A| |
S118 S67 |
6 | BAA10g08160 | A10 | 5556699 | C | T | upstream_gene_variant | MODIFIER | c.-4169C>T| |
S308 |
7 | BAA10g08160 | A10 | 5556840 | G | A | upstream_gene_variant | MODIFIER | c.-4028G>A| |
S273 |
8 | BAA10g08160 | A10 | 5556871 | G | A | upstream_gene_variant | MODIFIER | c.-3997G>A| |
S245 |
9 | BAA10g08160 | A10 | 5560873 | G | A | synonymous_variant | LOW | c.6G>A|p.Glu2Glu |
S125 |
10 | BAA10g08160 | A10 | 5564378 | G | A | synonymous_variant | LOW | c.453G>A|p.Glu151Glu |
S152 |
11 | BAA10g08160 | A10 | 5565806 | C | T | synonymous_variant | LOW | c.669C>T|p.Leu223Leu |
S142 |
12 | BAA10g08160 | A10 | 5565915 | G | A | missense_variant | MODERATE | c.778G>A|p.Ala260Thr |
S262 |
13 | BAA10g08160 | A10 | 5565979 | G | A | missense_variant | MODERATE | c.842G>A|p.Ser281Asn |
S76 |
14 | BAA10g08160 | A10 | 5566661 | G | A | splice_acceptor_variant&intron_variant | HIGH | c.971-1G>A| |
S64 |
15 | BAA10g08160 | A10 | 5567000 | G | A | missense_variant | MODERATE | c.1309G>A|p.Val437Met |
S120 S122 S266 S9 |
16 | BAA10g08160 | A10 | 5567204 | G | A | downstream_gene_variant | MODIFIER | c.*91G>A| |
S128 |
17 | BAA10g08160 | A10 | 5567437 | C | T | downstream_gene_variant | MODIFIER | c.*324C>T| |
S187 |
18 | BAA10g08160 | A10 | 5567630 | C | T | downstream_gene_variant | MODIFIER | c.*517C>T| |
S237 |
19 | BAA10g08160 | A10 | 5567822 | C | T | downstream_gene_variant | MODIFIER | c.*709C>T| |
S270 |
20 | BAA10g08160 | A10 | 5568832 | C | T | downstream_gene_variant | MODIFIER | c.*1719C>T| |
S237 |
21 | BAA10g08160 | A10 | 5571006 | G | A | downstream_gene_variant | MODIFIER | c.*3893G>A| |
S36 |
22 | BAA10g08160 | A10 | 5571044 | G | A | downstream_gene_variant | MODIFIER | c.*3931G>A| |
S262 |
23 | BAA10g08160 | A10 | 5571827 | G | A | downstream_gene_variant | MODIFIER | c.*4714G>A| |
S128 |
24 | BAA10g08160 | A10 | 5571944 | C | T | downstream_gene_variant | MODIFIER | c.*4831C>T| |
S270 |
25 | BAA10g08160 | A10 | 5572084 | C | T | downstream_gene_variant | MODIFIER | c.*4971C>T| |
S260 |