Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA10g10860 | A10 | 12599490 | G | A | downstream_gene_variant | MODIFIER | c.*3819C>T| |
S278 |
2 | BAA10g10860 | A10 | 12603386 | G | A | synonymous_variant | LOW | c.1093C>T|p.Leu365Leu |
S169 S174 S216 S241 S265 S39 |
3 | BAA10g10860 | A10 | 12603516 | G | A | synonymous_variant | LOW | c.963C>T|p.Ile321Ile |
S209 |
4 | BAA10g10860 | A10 | 12603613 | G | A | missense_variant | MODERATE | c.866C>T|p.Ser289Phe |
S240 |
5 | BAA10g10860 | A10 | 12604764 | G | A | intron_variant | MODIFIER | c.835-1120C>T| |
S59 |
6 | BAA10g10860 | A10 | 12604830 | C | T | intron_variant | MODIFIER | c.835-1186G>A| |
S180 |
7 | BAA10g10860 | A10 | 12604902 | G | A | intron_variant | MODIFIER | c.834+1149C>T| |
S207 |
8 | BAA10g10860 | A10 | 12605245 | C | T | intron_variant | MODIFIER | c.834+806G>A| |
S275 |
9 | BAA10g10860 | A10 | 12605247 | G | A | intron_variant | MODIFIER | c.834+804C>T| |
S292 |
10 | BAA10g10860 | A10 | 12606287 | G | A | stop_gained | HIGH | c.598C>T|p.Gln200* |
S59 |
11 | BAA10g10860 | A10 | 12607357 | G | A | intron_variant | MODIFIER | c.129-601C>T| |
S34 |
12 | BAA10g10860 | A10 | 12607576 | G | A | intron_variant | MODIFIER | c.129-820C>T| |
S69 |
13 | BAA10g10860 | A10 | 12608070 | C | T | intron_variant | MODIFIER | c.129-1314G>A| |
S123 |
14 | BAA10g10860 | A10 | 12609969 | G | A | intron_variant | MODIFIER | c.128+2785C>T| |
S1 |
15 | BAA10g10860 | A10 | 12610753 | G | A | intron_variant | MODIFIER | c.128+2001C>T| |
S228 |
16 | BAA10g10860 | A10 | 12612224 | G | A | intron_variant | MODIFIER | c.128+530C>T| |
S241 |
17 | BAA10g10860 | A10 | 12612760 | C | T | missense_variant | MODERATE | c.122G>A|p.Arg41Gln |
S10 |
18 | BAA10g10860 | A10 | 12615683 | G | A | upstream_gene_variant | MODIFIER | c.-2802C>T| |
S259 S71 |
19 | BAA10g10860 | A10 | 12616254 | C | T | upstream_gene_variant | MODIFIER | c.-3373G>A| |
S294 |
20 | BAA10g10860 | A10 | 12616299 | G | A | upstream_gene_variant | MODIFIER | c.-3418C>T| |
S178 |
21 | BAA10g10860 | A10 | 12616642 | C | T | upstream_gene_variant | MODIFIER | c.-3761G>A| |
S37 |
22 | BAA10g10860 | A10 | 12617399 | G | A | upstream_gene_variant | MODIFIER | c.-4518C>T| |
S241 |