Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA10g11680 | A10 | 13267992 | G | A | upstream_gene_variant | MODIFIER | c.-4230G>A| |
S35 |
2 | BAA10g11680 | A10 | 13268608 | G | A | upstream_gene_variant | MODIFIER | c.-3614G>A| |
S274 |
3 | BAA10g11680 | A10 | 13268856 | C | T | upstream_gene_variant | MODIFIER | c.-3366C>T| |
S282 |
4 | BAA10g11680 | A10 | 13272661 | C | T | missense_variant | MODERATE | c.440C>T|p.Pro147Leu |
S259 |
5 | BAA10g11680 | A10 | 13272861 | C | T | stop_gained | HIGH | c.640C>T|p.Arg214* |
S235 |
6 | BAA10g11680 | A10 | 13272948 | G | A | missense_variant | MODERATE | c.727G>A|p.Ala243Thr |
S202 |
7 | BAA10g11680 | A10 | 13273081 | G | A | missense_variant | MODERATE | c.860G>A|p.Arg287Lys |
S283 |
8 | BAA10g11680 | A10 | 13273136 | G | A | synonymous_variant | LOW | c.915G>A|p.Lys305Lys |
S274 |
9 | BAA10g11680 | A10 | 13273849 | C | T | missense_variant | MODERATE | c.1454C>T|p.Pro485Leu |
S23 |
10 | BAA10g11680 | A10 | 13273889 | C | T | synonymous_variant | LOW | c.1494C>T|p.Ser498Ser |
S249 |
11 | BAA10g11680 | A10 | 13273903 | G | A | missense_variant | MODERATE | c.1508G>A|p.Cys503Tyr |
S290 |
12 | BAA10g11680 | A10 | 13274453 | C | T | synonymous_variant | LOW | c.1848C>T|p.Asp616Asp |
S193 |
13 | BAA10g11680 | A10 | 13274928 | C | T | missense_variant | MODERATE | c.2323C>T|p.Pro775Ser |
S162 S169 |
14 | BAA10g11680 | A10 | 13275521 | C | T | missense_variant | MODERATE | c.2809C>T|p.Pro937Ser |
S190 |
15 | BAA10g11680 | A10 | 13277401 | C | T | intron_variant | MODIFIER | c.3154-447C>T| |
S260 |
16 | BAA10g11680 | A10 | 13277652 | C | T | intron_variant | MODIFIER | c.3154-196C>T| |
S237 |
17 | BAA10g11680 | A10 | 13277817 | C | T | intron_variant | MODIFIER | c.3154-31C>T| |
S56 |
18 | BAA10g11680 | A10 | 13277821 | C | T | intron_variant | MODIFIER | c.3154-27C>T| |
S177 |
19 | BAA10g11680 | A10 | 13278652 | G | A | downstream_gene_variant | MODIFIER | c.*673G>A| |
S136 |
20 | BAA10g11680 | A10 | 13278696 | C | T | downstream_gene_variant | MODIFIER | c.*717C>T| |
S195 |
21 | BAA10g11680 | A10 | 13278991 | C | T | downstream_gene_variant | MODIFIER | c.*1012C>T| |
S162 |
22 | BAA10g11680 | A10 | 13279198 | C | T | downstream_gene_variant | MODIFIER | c.*1219C>T| |
S103 |
23 | BAA10g11680 | A10 | 13279242 | C | T | downstream_gene_variant | MODIFIER | c.*1263C>T| |
S194 |
24 | BAA10g11680 | A10 | 13279314 | G | A | downstream_gene_variant | MODIFIER | c.*1335G>A| |
S55 |
25 | BAA10g11680 | A10 | 13279474 | C | T | downstream_gene_variant | MODIFIER | c.*1495C>T| |
S168 |