Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA10g12210 | A10 | 13656522 | G | A | upstream_gene_variant | MODIFIER | c.-4875G>A| |
S100 |
2 | BAA10g12210 | A10 | 13656847 | C | T | upstream_gene_variant | MODIFIER | c.-4550C>T| |
S249 |
3 | BAA10g12210 | A10 | 13657465 | G | A | upstream_gene_variant | MODIFIER | c.-3932G>A| |
S129 |
4 | BAA10g12210 | A10 | 13657501 | C | T | upstream_gene_variant | MODIFIER | c.-3896C>T| |
S224 |
5 | BAA10g12210 | A10 | 13657858 | G | A | upstream_gene_variant | MODIFIER | c.-3539G>A| |
S158 |
6 | BAA10g12210 | A10 | 13659255 | G | A | upstream_gene_variant | MODIFIER | c.-2142G>A| |
S176 |
7 | BAA10g12210 | A10 | 13659487 | G | A | upstream_gene_variant | MODIFIER | c.-1910G>A| |
S289 |
8 | BAA10g12210 | A10 | 13660106 | C | T | upstream_gene_variant | MODIFIER | c.-1291C>T| |
S92 |
9 | BAA10g12210 | A10 | 13660561 | C | T | upstream_gene_variant | MODIFIER | c.-836C>T| |
S260 |
10 | BAA10g12210 | A10 | 13660653 | G | A | upstream_gene_variant | MODIFIER | c.-744G>A| |
S161 |
11 | BAA10g12210 | A10 | 13661649 | C | T | synonymous_variant | LOW | c.144C>T|p.Tyr48Tyr |
S267 |
12 | BAA10g12210 | A10 | 13661655 | A | T | synonymous_variant | LOW | c.150A>T|p.Pro50Pro |
S267 |
13 | BAA10g12210 | A10 | 13662019 | T | A | synonymous_variant | LOW | c.450T>A|p.Leu150Leu |
S201 S213 S220 S226 S238 S239 S267 |
14 | BAA10g12210 | A10 | 13662025 | C | T | synonymous_variant | LOW | c.456C>T|p.His152His |
S201 S213 S220 S226 S238 S239 S267 |
15 | BAA10g12210 | A10 | 13662028 | C | T | synonymous_variant | LOW | c.459C>T|p.Ala153Ala |
S201 S213 S220 S226 S238 S239 S267 |
16 | BAA10g12210 | A10 | 13662031 | A | G | synonymous_variant | LOW | c.462A>G|p.Gln154Gln |
S201 S213 S220 S226 S238 S239 S267 |
17 | BAA10g12210 | A10 | 13662061 | T | C | synonymous_variant | LOW | c.492T>C|p.Val164Val |
S213 S220 S238 S239 S267 |
18 | BAA10g12210 | A10 | 13662067 | A | C | synonymous_variant | LOW | c.498A>C|p.Leu166Leu |
S213 S220 S238 S239 S267 |
19 | BAA10g12210 | A10 | 13662073 | A | T | synonymous_variant | LOW | c.504A>T|p.Gly168Gly |
S213 S220 S238 S239 S267 |
20 | BAA10g12210 | A10 | 13662076 | A | G | synonymous_variant | LOW | c.507A>G|p.Leu169Leu |
S213 S220 S238 S239 S267 |
21 | BAA10g12210 | A10 | 13662115 | T | C | synonymous_variant | LOW | c.546T>C|p.Gly182Gly |
S213 S220 S238 S239 S267 |
22 | BAA10g12210 | A10 | 13662124 | T | C | synonymous_variant | LOW | c.555T>C|p.Asn185Asn |
S213 S220 S238 S267 |
23 | BAA10g12210 | A10 | 13662136 | G | C | synonymous_variant | LOW | c.567G>C|p.Pro189Pro |
S213 S238 S267 |
24 | BAA10g12210 | A10 | 13662139 | C | T | synonymous_variant | LOW | c.570C>T|p.Gly190Gly |
S213 S238 S267 |
25 | BAA10g12210 | A10 | 13662158 | C | T | synonymous_variant | LOW | c.589C>T|p.Leu197Leu |
S213 S238 S267 |