Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA10g14920 | A10 | 15480580 | G | A | downstream_gene_variant | MODIFIER | c.*2579C>T| |
S18 |
2 | BAA10g14920 | A10 | 15481366 | G | A | downstream_gene_variant | MODIFIER | c.*1793C>T| |
S209 |
3 | BAA10g14920 | A10 | 15481521 | G | A | downstream_gene_variant | MODIFIER | c.*1638C>T| |
S208 |
4 | BAA10g14920 | A10 | 15481588 | G | A | downstream_gene_variant | MODIFIER | c.*1571C>T| |
S250 |
5 | BAA10g14920 | A10 | 15481766 | G | A | downstream_gene_variant | MODIFIER | c.*1393C>T| |
S245 |
6 | BAA10g14920 | A10 | 15482647 | G | A | downstream_gene_variant | MODIFIER | c.*512C>T| |
S18 |
7 | BAA10g14920 | A10 | 15482869 | G | A | downstream_gene_variant | MODIFIER | c.*290C>T| |
S138 |
8 | BAA10g14920 | A10 | 15483295 | G | A | intron_variant | MODIFIER | c.3211+40C>T| |
S176 |
9 | BAA10g14920 | A10 | 15483308 | G | A | intron_variant | MODIFIER | c.3211+27C>T| |
S120 |
10 | BAA10g14920 | A10 | 15483579 | G | A | synonymous_variant | LOW | c.3063C>T|p.Asn1021Asn |
S65 |
11 | BAA10g14920 | A10 | 15483902 | G | A | intron_variant | MODIFIER | c.2904+25C>T| |
S132 S137 S215 |
12 | BAA10g14920 | A10 | 15484759 | G | A | intron_variant | MODIFIER | c.2484+17C>T| |
S144 |
13 | BAA10g14920 | A10 | 15484858 | G | A | missense_variant | MODERATE | c.2402C>T|p.Ala801Val |
S283 |
14 | BAA10g14920 | A10 | 15484951 | C | T | intron_variant | MODIFIER | c.2385+14G>A| |
S84 S93 |
15 | BAA10g14920 | A10 | 15485966 | G | A | intron_variant | MODIFIER | c.1875+45C>T| |
S62 |
16 | BAA10g14920 | A10 | 15486223 | C | T | intron_variant | MODIFIER | c.1764+24G>A| |
S259 |
17 | BAA10g14920 | A10 | 15486372 | C | T | intron_variant | MODIFIER | c.1666-27G>A| |
S180 |
18 | BAA10g14920 | A10 | 15487245 | G | A | splice_region_variant&intron_variant | LOW | c.1291-3C>T| |
S3 |
19 | BAA10g14920 | A10 | 15489538 | C | T | synonymous_variant | LOW | c.174G>A|p.Arg58Arg |
S104 S52 |
20 | BAA10g14920 | A10 | 15490198 | G | A | upstream_gene_variant | MODIFIER | c.-387C>T| |
S71 |
21 | BAA10g14920 | A10 | 15490773 | G | A | upstream_gene_variant | MODIFIER | c.-962C>T| |
S110 |
22 | BAA10g14920 | A10 | 15491536 | G | A | upstream_gene_variant | MODIFIER | c.-1725C>T| |
S36 |
23 | BAA10g14920 | A10 | 15492550 | C | T | upstream_gene_variant | MODIFIER | c.-2739G>A| |
S10 |
24 | BAA10g14920 | A10 | 15494277 | G | A | upstream_gene_variant | MODIFIER | c.-4466C>T| |
S167 |