Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA10g17760 | A10 | 16954489 | C | T | upstream_gene_variant | MODIFIER | c.-2559C>T| |
S283 |
2 | BAA10g17760 | A10 | 16954947 | C | T | upstream_gene_variant | MODIFIER | c.-2101C>T| |
S25 |
3 | BAA10g17760 | A10 | 16954948 | G | A | upstream_gene_variant | MODIFIER | c.-2100G>A| |
S167 |
4 | BAA10g17760 | A10 | 16955583 | G | A | upstream_gene_variant | MODIFIER | c.-1465G>A| |
S131 |
5 | BAA10g17760 | A10 | 16956009 | G | A | upstream_gene_variant | MODIFIER | c.-1039G>A| |
S178 |
6 | BAA10g17760 | A10 | 16956082 | C | T | upstream_gene_variant | MODIFIER | c.-966C>T| |
S92 |
7 | BAA10g17760 | A10 | 16956532 | C | T | upstream_gene_variant | MODIFIER | c.-516C>T| |
S187 |
8 | BAA10g17760 | A10 | 16956707 | G | A | upstream_gene_variant | MODIFIER | c.-341G>A| |
S139 |
9 | BAA10g17760 | A10 | 16957771 | G | A | stop_gained | HIGH | c.534G>A|p.Trp178* |
S264 |
10 | BAA10g17760 | A10 | 16958304 | C | T | synonymous_variant | LOW | c.762C>T|p.Val254Val |
S281 |
11 | BAA10g17760 | A10 | 16958424 | C | T | splice_region_variant&intron_variant | LOW | c.874+8C>T| |
S149 |
12 | BAA10g17760 | A10 | 16958677 | C | T | synonymous_variant | LOW | c.1038C>T|p.Val346Val |
S46 |
13 | BAA10g17760 | A10 | 16958695 | G | A | synonymous_variant | LOW | c.1056G>A|p.Leu352Leu |
S88 |
14 | BAA10g17760 | A10 | 16958830 | G | A | synonymous_variant | LOW | c.1101G>A|p.Arg367Arg |
S181 |
15 | BAA10g17760 | A10 | 16958977 | C | T | splice_region_variant&intron_variant | LOW | c.1162-4C>T| |
S173 |
16 | BAA10g17760 | A10 | 16959548 | C | T | missense_variant | MODERATE | c.1466C>T|p.Ser489Phe |
S203 |
17 | BAA10g17760 | A10 | 16962205 | C | T | downstream_gene_variant | MODIFIER | c.*384C>T| |
S81 S85 |