Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
1 | BAA10g19810 | A10 | 18037985 | C | T | upstream_gene_variant | MODIFIER | c.-4496C>T| |
S142 |
2 | BAA10g19810 | A10 | 18038019 | C | T | upstream_gene_variant | MODIFIER | c.-4462C>T| |
S196 |
3 | BAA10g19810 | A10 | 18038033 | C | T | upstream_gene_variant | MODIFIER | c.-4448C>T| |
S110 |
4 | BAA10g19810 | A10 | 18038338 | G | A | upstream_gene_variant | MODIFIER | c.-4143G>A| |
S164 |
5 | BAA10g19810 | A10 | 18038663 | G | A | upstream_gene_variant | MODIFIER | c.-3818G>A| |
S136 |
6 | BAA10g19810 | A10 | 18038910 | C | T | upstream_gene_variant | MODIFIER | c.-3571C>T| |
S202 |
7 | BAA10g19810 | A10 | 18039139 | C | T | upstream_gene_variant | MODIFIER | c.-3342C>T| |
S133 |
8 | BAA10g19810 | A10 | 18039539 | G | A | upstream_gene_variant | MODIFIER | c.-2942G>A| |
S245 |
9 | BAA10g19810 | A10 | 18040179 | C | T | upstream_gene_variant | MODIFIER | c.-2302C>T| |
S230 |
10 | BAA10g19810 | A10 | 18041153 | C | T | upstream_gene_variant | MODIFIER | c.-1328C>T| |
S68 |
11 | BAA10g19810 | A10 | 18042822 | G | A | synonymous_variant | LOW | c.261G>A|p.Lys87Lys |
S193 |
12 | BAA10g19810 | A10 | 18042839 | G | A | stop_gained | HIGH | c.278G>A|p.Trp93* |
S167 |
13 | BAA10g19810 | A10 | 18043340 | C | T | synonymous_variant | LOW | c.621C>T|p.Leu207Leu |
S249 |
14 | BAA10g19810 | A10 | 18043708 | G | A | intron_variant | MODIFIER | c.660-19G>A| |
S163 |
15 | BAA10g19810 | A10 | 18043949 | C | T | synonymous_variant | LOW | c.882C>T|p.Leu294Leu |
S249 |
16 | BAA10g19810 | A10 | 18044113 | C | T | synonymous_variant | LOW | c.972C>T|p.Tyr324Tyr |
S115 |
17 | BAA10g19810 | A10 | 18044320 | G | A | synonymous_variant | LOW | c.1089G>A|p.Arg363Arg |
S202 |
18 | BAA10g19810 | A10 | 18044647 | G | A | synonymous_variant | LOW | c.1335G>A|p.Gly445Gly |
S262 |
19 | BAA10g19810 | A10 | 18044665 | G | A | stop_gained | HIGH | c.1353G>A|p.Trp451* |
S9 |
20 | BAA10g19810 | A10 | 18044820 | A | C | synonymous_variant | LOW | c.1437A>C|p.Pro479Pro |
S11 S143 S156 S159 S18 S208 S224 S263 S279 S287 S290 S292 S295 S30 S34 S49 S51 |
21 | BAA10g19810 | A10 | 18045607 | G | A | downstream_gene_variant | MODIFIER | c.*343G>A| |
S159 S243 |
22 | BAA10g19810 | A10 | 18046137 | G | A | downstream_gene_variant | MODIFIER | c.*873G>A| |
S74 |
23 | BAA10g19810 | A10 | 18048614 | G | A | downstream_gene_variant | MODIFIER | c.*3350G>A| |
S138 |
24 | BAA10g19810 | A10 | 18049156 | G | A | downstream_gene_variant | MODIFIER | c.*3892G>A| |
S79 S84 |